RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ZSCAN26Q16670 478 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 PRR16Q569H4 304 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 CDAN1Q8IWY9 1227 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 SAMD3Q8N6K7 520 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 USP38Q8NB14 1042 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 LMO3Q8TAP4 145 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 NEK9Q8TD19 979 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 KCNN1Q92952 543 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 ST6GALNAC4Q9H4F1 302 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 POLD4Q9HCU8 107 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 ARMCX3Q9UH62 379 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 RSPH14Q9UHP6 348 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 LRRC37A2A6NM11 1700 aa7.82□□□□□ -1.16
CTNNA1-244ENST00000627109 ATXN2Q99700 1313 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 SRRM3A6NNA2 597 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 MEIS1O00470 390 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 LYPLA2O95372 231 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 GGCXP38435 758 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 MAPK7Q13164 816 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 RAPGEF1Q13905 1077 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 SUPT20HL1Q3ZLR7 823 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 LRRC31Q6UY01 552 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 USP50Q70EL3 339 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 PAF1Q8N7H5 531 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 TBC1D5Q92609 795 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 PBKQ96KB5 322 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.81□□□□□ -1.162e-13■■■□□ 15
CTNNA1-244ENST00000627109 COL11A1P12107 1806 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 PFASO15067 1338 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 GRIN2DO15399 1336 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 GOLGA8KD6RF30 607 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 ZEB2O60315 1214 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 IVLP07476 585 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 NOP2P46087 812 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 ENPEPQ07075 957 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 TSNAXIP1Q2TAA8 658 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 HES6Q96HZ4 224 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 PAGR1Q9BTK6 254 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 FAM204AQ9H8W3 233 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 SUCLA2Q9P2R7 463 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 hCG_2014768A0A024R1R8 64 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 SPDYE3A6NKU9 549 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 MAFGO15525 162 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 NCK2O43639 380 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 GDF11O95390 407 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 SLC9A1P19634 815 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 RPL13P26373 211 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 POU5F1Q01860 360 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 PPATQ06203 517 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 GBP6Q6ZN66 633 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 ZNF720Q7Z2F6 126 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 FMNL3Q8IVF7 1028 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 FAM151AQ8WW52 585 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 PACSIN1Q9BY11 444 aa7.81□□□□□ -1.16
CTNNA1-244ENST00000627109 RSPH10B2B2RC85 870 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 RSPH10BP0C881 870 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 XRCC5P13010 732 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 HSPA9P38646 679 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 STAT2P52630 851 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SNAP25P60880 206 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SNRPFP62306 86 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SLC7A5Q01650 507 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 KLHL30Q0D2K2 578 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 KIF22Q14807 665 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SKIV2LQ15477 1246 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 EXOC3L4Q17RC7 722 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 USH1GQ495M9 461 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SPDYE2Q495Y8 402 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 CHADLQ6NUI6 762 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 C10orf67Q8IYJ2 551 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 FAM133AQ8N9E0 248 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 TSEN2Q8NCE0 465 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 TPCN2Q8NHX9 752 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 IFT81Q8WYA0 676 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 RIT2Q99578 217 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 WRAP73Q9P2S5 460 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 GH2P01242 217 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 GLI1P08151 1106 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 HUNKP57058 714 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 PABPC4Q13310 644 aaKnown RBP eCLIP7.8□□□□□ -1.162e-8■■□□□ 13.2
CTNNA1-244ENST00000627109 SND1Q7KZF4 910 aaKnown RBP eCLIP7.8□□□□□ -1.167e-7■□□□□ 8.6
CTNNA1-244ENST00000627109 C2orf69Q8N8R5 385 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 AFAP1L1Q8TED9 768 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SPAG5Q96R06 1193 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SEPT11Q9NVA2 429 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 MAP3K20Q9NYL2 800 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 DBR1Q9UK59 544 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 A6NNZ2 444 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 F8VZ95 297 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 DDX3XO00571 662 aaKnown RBP eCLIP7.8□□□□□ -1.163e-10■■■■□ 25.2
CTNNA1-244ENST00000627109 TOMM70O94826 608 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 FERP16591 822 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 TUBB8Q3ZCM7 444 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 DCAF17Q5H9S7 520 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 FAM160B2Q86V87 743 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 APOBEC3FQ8IUX4 373 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 WHAMMQ8TF30 809 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 WRNIP1Q96S55 665 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms