RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 DDX20Q9UHI6 824 aaKnown RBP18.96■□□□□ 0.63
FARP1-242ENST00000627049 SPAG7O75391 227 aa18.96■□□□□ 0.63
FARP1-242ENST00000627049 ANP32DO95626 131 aa18.96■□□□□ 0.63
FARP1-242ENST00000627049 BASP1P80723 227 aaKnown RBP18.96■□□□□ 0.63
FARP1-242ENST00000627049 TTC17Q96AE7 1141 aa18.96■□□□□ 0.63
FARP1-242ENST00000627049 PPARGC1AQ9UBK2 798 aaKnown RBP18.96■□□□□ 0.63
FARP1-242ENST00000627049 PDXKO00764 312 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 KRT19P08727 400 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 PDE6BP35913 854 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 PDE1CQ14123 709 aaPredicted RBP18.95■□□□□ 0.62
FARP1-242ENST00000627049 PPP1R2P3Q6NXS1 205 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 CREG2Q8IUH2 290 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 TMEM139Q8IV31 216 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 C1orf54Q8WWF1 131 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 ROPN1BQ9BZX4 212 aaPredicted RBP18.95■□□□□ 0.62
FARP1-242ENST00000627049 ROPN1Q9HAT0 212 aaPredicted RBP18.95■□□□□ 0.62
FARP1-242ENST00000627049 KBTBD4Q9NVX7 518 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 TMEM120BA0PK00 339 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 STAT4Q14765 748 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 DEPTORQ8TB45 409 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 HAUS1Q96CS2 278 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 DYDC2Q96IM9 177 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 H0YCG3 227 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 SCP2P22307 547 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 SCNN1DP51172 638 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 SNX16P57768 344 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 ITIH4Q14624 930 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 ARHGAP18Q8N392 663 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 DHX36Q9H2U1 1008 aaKnown RBP18.95■□□□□ 0.62
FARP1-242ENST00000627049 PABPC3Q9H361 631 aaKnown RBP18.95■□□□□ 0.62
FARP1-242ENST00000627049 TRPC6Q9Y210 931 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 ARHGEF28Q8N1W1 1705 aaKnown RBP18.95■□□□□ 0.62
FARP1-242ENST00000627049 ABCB11O95342 1321 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 SPECC1L-ADORA2AF8WAN1 911 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 CDH16O75309 829 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 SLC9A1P19634 815 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 COPS2P61201 443 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 UBXN2AP68543 259 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 KRT17Q04695 432 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 PPP2R5DQ14738 602 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 ATG16L1Q676U5 607 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 MINPP1Q9UNW1 487 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 PPLO60437 1756 aa18.95■□□□□ 0.62
FARP1-242ENST00000627049 ARFIP2P53365 341 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 DBN1Q16643 649 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 GEN1Q17RS7 908 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 TSEN2Q8NCE0 465 aaKnown RBP18.94■□□□□ 0.62
FARP1-242ENST00000627049 CEP95Q96GE4 821 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 CFAP69A5D8W1 941 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 ZBTB5O15062 677 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 GSTA1P08263 222 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 DYNLT1P63172 113 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 TBC1D10BQ4KMP7 808 aaPredicted RBP18.94■□□□□ 0.62
FARP1-242ENST00000627049 ANKRD20A8PQ5CZ79 823 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 SWT1Q5T5J6 900 aaKnown RBP18.94■□□□□ 0.62
FARP1-242ENST00000627049 PPP1R18Q6NYC8 613 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 GINM1Q9NU53 330 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L15C9J2P7 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L13C9JLJ4 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L11C9JVI0 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L18D6R9N7 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L22D6RA61 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L17D6RBQ6 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L19D6RCP7 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L20D6RJB6 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 GCLMP48507 274 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L24Q0WX57 530 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 USP17L6PQ6QN14 398 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 RFX6Q8HWS3 928 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 NME8Q8N427 588 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 ABTB1Q969K4 478 aaPredicted RBP18.94■□□□□ 0.62
FARP1-242ENST00000627049 ATP6V0A4Q9HBG4 840 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 EDRF1Q3B7T1 1238 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 GRAMD1BQ3KR37 738 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 SCYL2Q6P3W7 929 aa18.94■□□□□ 0.62
FARP1-242ENST00000627049 NQO1P15559 274 aaKnown RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 MRPS35P82673 323 aaKnown RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 ALCAMQ13740 583 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 BRDTQ58F21 947 aaPredicted RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 NXNQ6DKJ4 435 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 NLRP7Q8WX94 980 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 CDKL2Q92772 493 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 ERP27Q96DN0 273 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 ZSCAN5CA6NGD5 496 aaPredicted RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 RFX1P22670 979 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 PDE1BQ01064 536 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 A0A087X0B3 334 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 GMNNO75496 209 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 TJP3O95049 919 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 PMS1P54277 932 aaKnown RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 MEA1Q16626 185 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 CDAN1Q8IWY9 1227 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 MROH1Q8NDA8 1641 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 PDE2AO00408 941 aaPredicted RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 HNRNPCL1O60812 293 aaKnown RBP18.93■□□□□ 0.62
FARP1-242ENST00000627049 BARGINQ6ZT62 677 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 MTMR8Q96EF0 704 aa18.93■□□□□ 0.62
FARP1-242ENST00000627049 AGPAT1Q99943 283 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms