RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MRPL38Q96DV4 380 aaKnown RBP24.92■■□□□ 1.58
SF1-220ENST00000626028 CCDC43Q96MW1 224 aaKnown RBP24.92■■□□□ 1.58
SF1-220ENST00000626028 NACC1Q96RE7 527 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 DBR1Q9UK59 544 aaKnown RBP24.92■■□□□ 1.58
SF1-220ENST00000626028 BRWD1Q9NSI6 2320 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 EOMESO95936 686 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 SKIP12755 728 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 RARRES1P49788 294 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 CCDC85BQ15834 202 aaPredicted RBP24.91■■□□□ 1.58
SF1-220ENST00000626028 CATSPER3Q86XQ3 398 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 PPM1EQ8WY54 764 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 NLRP4Q96MN2 994 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 LMAN2LQ9H0V9 348 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 ATP6V0A4Q9HBG4 840 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 IFT122Q9HBG6 1241 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 THEGQ9P2T0 379 aa24.91■■□□□ 1.58
SF1-220ENST00000626028 A0A0U1RQF3 1178 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 ZBTB39O15060 712 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 CTNNB1P35222 781 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 LAMTOR4Q0VGL1 99 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 PTGDRQ13258 359 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 GPM6BQ13491 265 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 MCTP1Q6DN14 999 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 FERMT3Q86UX7 667 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 COG5Q9UP83 839 aa24.9■■□□□ 1.58
SF1-220ENST00000626028 PDCP20941 246 aa24.89■■□□□ 1.58
SF1-220ENST00000626028 LARP1BQ659C4 914 aaKnown RBP24.89■■□□□ 1.58
SF1-220ENST00000626028 IGSF22Q8N9C0 903 aa24.89■■□□□ 1.58
SF1-220ENST00000626028 TMEM143Q96AN5 459 aa24.89■■□□□ 1.58
SF1-220ENST00000626028 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.89■■□□□ 1.58
SF1-220ENST00000626028 PCDHB6Q9Y5E3 794 aa24.89■■□□□ 1.58
SF1-220ENST00000626028 TFDP1Q14186 410 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 CSPP1Q1MSJ5 1256 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 AAK1Q2M2I8 961 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 TIGD5Q53EQ6 642 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 ECHDC2Q86YB7 292 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 IFNLR1Q8IU57 520 aaPredicted RBP24.88■■□□□ 1.57
SF1-220ENST00000626028 MICALL1Q8N3F8 863 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 MCPH1Q8NEM0 835 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 ZNF668Q96K58 619 aaPredicted RBP24.88■■□□□ 1.57
SF1-220ENST00000626028 NFKBIZQ9BYH8 718 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 TMEM117Q9H0C3 514 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 XPNPEP1Q9NQW7 623 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 AAASQ9NRG9 546 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 MRPL42Q9Y6G3 142 aaKnown RBP24.88■■□□□ 1.57
SF1-220ENST00000626028 CUL9Q8IWT3 2517 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 MYO7AQ13402 2215 aa24.88■■□□□ 1.57
SF1-220ENST00000626028 PLXNA4Q9HCM2 1894 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 PHKA2P46019 1235 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 RAB27AP51159 221 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 CATSPER4Q7RTX7 472 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 KSR1Q8IVT5 923 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 PIGOQ8TEQ8 1089 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 SYMPKQ92797 1274 aaKnown RBP24.87■■□□□ 1.57
SF1-220ENST00000626028 INTS4Q96HW7 963 aaKnown RBP24.87■■□□□ 1.57
SF1-220ENST00000626028 LRWD1Q9UFC0 647 aa24.87■■□□□ 1.57
SF1-220ENST00000626028 MED24O75448 989 aa24.86■■□□□ 1.57
SF1-220ENST00000626028 SRGAP2CP0DJJ0 459 aa24.86■■□□□ 1.57
SF1-220ENST00000626028 MRPS5P82675 430 aaKnown RBP24.86■■□□□ 1.57
SF1-220ENST00000626028 KCTD17Q8N5Z5 321 aa24.86■■□□□ 1.57
SF1-220ENST00000626028 RNF149Q8NC42 400 aa24.86■■□□□ 1.57
SF1-220ENST00000626028 AGPAT5Q9NUQ2 364 aa24.86■■□□□ 1.57
SF1-220ENST00000626028 DAXXQ9UER7 740 aaPredicted RBP24.86■■□□□ 1.57
SF1-220ENST00000626028 TBKBP1A7MCY6 615 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 ZNF623O75123 536 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 AXLP30530 894 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 ARL2P36404 184 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 NBR1Q14596 966 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 ARL6IP4Q66PJ3 421 aaKnown RBP24.85■■□□□ 1.57
SF1-220ENST00000626028 DTHD1Q6ZMT9 781 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 BRAPQ7Z569 592 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 ZNF598Q86UK7 904 aaKnown RBP24.85■■□□□ 1.57
SF1-220ENST00000626028 ABI1Q8IZP0 508 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 PIN4Q9Y237 131 aaKnown RBP24.85■■□□□ 1.57
SF1-220ENST00000626028 GTF3C3Q9Y5Q9 886 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 NCOR1O75376 2440 aa24.85■■□□□ 1.57
SF1-220ENST00000626028 MYH11P35749 1972 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 CARNS1A5YM72 827 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 CSDE1O75534 798 aaKnown RBP24.84■■□□□ 1.57
SF1-220ENST00000626028 FGFR4P22455 802 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 PTENP60484 403 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 ATP2C1P98194 919 aaPredicted RBP24.84■■□□□ 1.57
SF1-220ENST00000626028 SKIV2LQ15477 1246 aaKnown RBP24.84■■□□□ 1.57
SF1-220ENST00000626028 PAN2Q504Q3 1202 aaKnown RBP24.84■■□□□ 1.57
SF1-220ENST00000626028 TJAP1Q5JTD0 557 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 FAM102BQ5T8I3 360 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 TWF2Q6IBS0 349 aaKnown RBP24.84■■□□□ 1.57
SF1-220ENST00000626028 PLAGL2Q9UPG8 496 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 PCDHB12Q9Y5F1 795 aa24.84■■□□□ 1.57
SF1-220ENST00000626028 FGFR1P11362 822 aa24.83■■□□□ 1.57
SF1-220ENST00000626028 CCT6AP40227 531 aaKnown RBP24.83■■□□□ 1.57
SF1-220ENST00000626028 NCBP1Q09161 790 aaKnown RBP24.83■■□□□ 1.57
SF1-220ENST00000626028 POTEGQ6S5H5 508 aa24.83■■□□□ 1.57
SF1-220ENST00000626028 HLA-CQ95604 372 aa24.83■■□□□ 1.57
SF1-220ENST00000626028 ASB2Q96Q27 587 aa24.83■■□□□ 1.57
SF1-220ENST00000626028 XIRP2A4UGR9 3374 aa24.83■■□□□ 1.57
SF1-220ENST00000626028 NCK2O43639 380 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 BMP15O95972 392 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 LAG3P18627 525 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 UBE3AQ05086 875 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms