RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 RNF149Q8NC42 400 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 TMEM143Q96AN5 459 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 CCDC51Q96ER9 411 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 IFT74Q96LB3 600 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 DRC1Q96MC2 740 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 FDXACB1Q9BRP7 624 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 TRAIPQ9BWF2 469 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 CCSER1Q9C0I3 900 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 XPNPEP1Q9NQW7 623 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 CCDC39Q9UFE4 941 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 GBF1Q92538 1859 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 GRXCR1A8MXD5 290 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 ZBTB39O15060 712 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 PPP6R2O75170 966 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 AXLP30530 894 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 ZBTB8OSQ8IWT0 167 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 KCNG4Q8TDN1 519 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 PPP1R16BQ96T49 567 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 ADAM2Q99965 735 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 POLR3FQ9H1D9 316 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 CDHR5Q9HBB8 845 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 IFT122Q9HBG6 1241 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 PCDHB7Q9Y5E2 793 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 CLIC4Q9Y696 253 aa15.53■□□□□ 0.08
SNRPA1-216ENST00000626000 CARNS1A5YM72 827 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 EOMESO95936 686 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 CA3P07451 260 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 SRGAP2CP0DJJ0 459 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 PBX2P40425 430 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 NAMPTP43490 491 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 EFNA5P52803 228 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 PTENP60484 403 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 TCTN1Q2MV58 587 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 TMEM119Q4V9L6 283 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 FAM102BQ5T8I3 360 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 PRIMPOLQ96LW4 560 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 USP28Q96RU2 1077 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 MMTAG2Q9BU76 263 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 OSBPL7Q9BZF2 842 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 NKX2-4Q9H2Z4 354 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 TMX1Q9H3N1 280 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 SEMA6BQ9H3T3 888 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 TMEM161AQ9NX61 479 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 STK17AQ9UEE5 414 aa15.52■□□□□ 0.08
SNRPA1-216ENST00000626000 PTPRSQ13332 1948 aa15.52■□□□□ 0.07
SNRPA1-216ENST00000626000 PP2D1A8MPX8 630 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 C9IYK1 514 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 ABCD1P33897 745 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 RABGGTBP53611 331 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 DSC3Q14574 896 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 ZRSR1Q15695 479 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 CMTR2Q8IYT2 770 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 HACE1Q8IYU2 909 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 SYT2Q8N9I0 419 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 LINC00301Q8NCQ3 95 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 TGS1Q96RS0 853 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 BMP2KQ9NSY1 1161 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 AGPAT5Q9NUQ2 364 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 MTMR10Q9NXD2 777 aa15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 FBXO2Q9UK22 296 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 YBX2Q9Y2T7 364 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 LAMA2P24043 3122 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-216ENST00000626000 ADGRA3Q8IWK6 1321 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 A0A0U1RQF3 1178 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 H0YCG3 227 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 SPTLC2O15270 562 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 DGKIO75912 1065 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 UPP2O95045 317 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 GLRA2P23416 452 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 CDC25AP30304 524 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 NUCB2P80303 420 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 FAM189BP81408 668 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 DMP1Q13316 513 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 CAPSQ13938 189 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 TWF2Q6IBS0 349 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 CCDC73Q6ZRK6 1079 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 APBB1IPQ7Z5R6 666 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 KSR1Q8IVT5 923 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 ABI1Q8IZP0 508 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 FIBCD1Q8N539 461 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 DEPTORQ8TB45 409 aa15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 GAS2L1Q99501 681 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 PYM1Q9BRP8 204 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 PRMT7Q9NVM4 692 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 PIN4Q9Y237 131 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 RBM19Q9Y4C8 960 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-216ENST00000626000 LRRIQ4A6NIV6 560 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 E9PMD0 336 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 INO80B-WBP1J3KQ70 363 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 BRD1O95696 1058 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 TAP1Q03518 808 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 GRB10Q13322 594 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 ECM1Q16610 540 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms