RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 FBXO18Q8NFZ0 1043 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 POF1BQ8WVV4 589 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
SSBP4-215ENST00000625926 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
SSBP4-215ENST00000625926 TMEM143Q96AN5 459 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 CASD1Q96PB1 797 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 MTMR9Q96QG7 549 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 TRAIPQ9BWF2 469 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 FOXP1Q9H334 677 aaPredicted RBP12.11□□□□□ -0.47
SSBP4-215ENST00000625926 CLDND1Q9NY35 253 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 H3BQ06 376 aaPredicted RBP12.1□□□□□ -0.47
SSBP4-215ENST00000625926 WNT7AO00755 349 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 ZBTB39O15060 712 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 ASAP2O43150 1006 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 GAS2O43903 313 aaKnown RBP12.1□□□□□ -0.47
SSBP4-215ENST00000625926 CSPG5O95196 566 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 SKIP12755 728 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 LAG3P18627 525 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 DNAJB1P25685 340 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 MCM7P33993 719 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 HYAL1Q12794 435 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 EMC2Q15006 297 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
SSBP4-215ENST00000625926 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
SSBP4-215ENST00000625926 CATSPER4Q7RTX7 472 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 SRGAP1Q7Z6B7 1085 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 THNSL1Q8IYQ7 743 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 MICAL1Q8TDZ2 1067 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 IGFLR1Q9H665 355 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 CWH43Q9H720 699 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 ANKEF1Q9NU02 776 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 RNF19AQ9NV58 838 aa12.1□□□□□ -0.47
SSBP4-215ENST00000625926 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
SSBP4-215ENST00000625926 CHD7Q9P2D1 2997 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 GBF1Q92538 1859 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 GRXCR2A6NFK2 248 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 FGF18O76093 207 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 XRCC6P12956 609 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 IRS1P35568 1242 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 PHKA2P46019 1235 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 LAMTOR4Q0VGL1 99 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 ORC2Q13416 577 aaPredicted RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 GNL2Q13823 731 aaKnown RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 RABEP1Q15276 862 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 LRRC55Q6ZSA7 311 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 RSPH1Q8WYR4 309 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 MTRQ99707 1265 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 TMEM60Q9H2L4 133 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 UPF2Q9HAU5 1272 aaKnown RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 PUF60Q9UHX1 559 aaKnown RBP12.09□□□□□ -0.47
SSBP4-215ENST00000625926 FAM50BQ9Y247 325 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
SSBP4-215ENST00000625926 ST18O60284 1047 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 ZNF623O75123 536 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 DGAT1O75907 488 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 LTBRP36941 435 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 RAB27AP51159 221 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 PLCB3Q01970 1234 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 KRT17Q04695 432 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 ADAM15Q13444 863 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
SSBP4-215ENST00000625926 ZNF174Q15697 407 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 CLLU1OSQ5K130 101 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 PDE12Q6L8Q7 609 aaKnown RBP12.08□□□□□ -0.48
SSBP4-215ENST00000625926 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 RNF149Q8NC42 400 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 CCDC43Q96MW1 224 aaKnown RBP12.08□□□□□ -0.48
SSBP4-215ENST00000625926 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 FAM105AQ9NUU6 356 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
SSBP4-215ENST00000625926 POTEMA6NI47 508 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 IL9P15248 144 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 ATF7P17544 494 aaPredicted RBP12.07□□□□□ -0.48
SSBP4-215ENST00000625926 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.487e-7■■■■■ 28.3
SSBP4-215ENST00000625926 PPM1AP35813 382 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 TECP42680 631 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 NRIP1P48552 1158 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 TRAPPC10P48553 1259 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 RARRES1P49788 294 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 POU5F1BQ06416 359 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
SSBP4-215ENST00000625926 TFDP1Q14186 410 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 PCBP1Q15365 356 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSBP4-215ENST00000625926 TTC38Q5R3I4 469 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms