RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SLC26A4O43511 780 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 ATP1A1P05023 1023 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 CMA1P23946 247 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 BAATQ14032 418 aaPredicted RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 CEP68Q76N32 757 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 TSC1Q92574 1164 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 SEPT5Q99719 369 aaPredicted RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 TMEM47Q9BQJ4 181 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 YIPF2Q9BWQ6 316 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 FAM129AQ9BZQ8 928 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 ESPNB1AK53 854 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 POLR2FP61218 127 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 YWHAGP61981 247 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS8-227ENST00000625842 MORC3Q14149 939 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 AAK1Q2M2I8 961 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 DARS2Q6PI48 645 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 CD302Q8IX05 232 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 RNF149Q8NC42 400 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 MRRFQ96E11 262 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 DDX56Q9NY93 547 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 IMPACTQ9P2X3 320 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 BTBD18B2RXH4 712 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 H3BRJ5 948 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 SNX2O60749 519 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 IL18RAPO95256 599 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 SAT1P21673 171 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 EEF1GP26641 437 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 PEX6Q13608 980 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 CDK5RAP1Q96SZ6 601 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 PARNO95453 639 aaKnown RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 TTC4O95801 387 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 ANO4Q32M45 955 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 ULK4Q96C45 1275 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 OTUB1Q96FW1 271 aaPredicted RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 DAGLAQ9Y4D2 1042 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 CPDO75976 1380 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 CASQ2O14958 399 aaPredicted RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 ADCY3O60266 1144 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 KRT1P04264 644 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 DDIT3P35638 169 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 CTTNQ14247 550 aaKnown RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 KRT39Q6A163 491 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 SCARA5Q6ZMJ2 495 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 CCDC121Q6ZUS5 278 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 RILPQ96NA2 401 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 MED15Q96RN5 788 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 PCIF1Q9H4Z3 704 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 SELENONQ9NZV5 590 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 SPACA6W5XKT8 324 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 DCCP43146 1447 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 MGEA5O60502 916 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 ODC1P11926 461 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 MCAMP43121 646 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 DENND2CQ68D51 928 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 NXNQ6DKJ4 435 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 CPS1P31327 1500 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 TTLL13PA6NNM8 815 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 E5RI56 91 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 ETFBP38117 255 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 UBE2SQ16763 222 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
VPS8-227ENST00000625842 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 STK39Q9UEW8 545 aa11.86□□□□□ -0.51
VPS8-227ENST00000625842 ABCC3O15438 1527 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 SGK1O00141 431 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 PQBP1O60828 265 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 PSMA3P25788 255 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 MAP4P27816 1152 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 FANCCQ00597 558 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 MAN2A1Q16706 1144 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 SYTL3Q4VX76 610 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 TAF1BQ53T94 588 aaPredicted RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 KLHL8Q9P2G9 620 aaPredicted RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 CPA4Q9UI42 421 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 PSMD3O43242 534 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 SLC11A2P49281 568 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 FBXO18Q8NFZ0 1043 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms