RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PPFIA1Q13136 1202 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 FAM160B1Q5W0V3 765 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 GALNT17Q6IS24 598 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 SLCO4C1Q6ZQN7 724 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 RSPH3Q86UC2 560 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
TCF4-249ENST00000625716 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 C1orf216Q8TAB5 229 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 CYP2W1Q8TAV3 490 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 TIFAQ96CG3 184 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 ZNF577Q9BSK1 485 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 SEMA6BQ9H3T3 888 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 SUV39H2Q9H5I1 410 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 AGO4Q9HCK5 861 aaKnown RBP7.25□□□□□ -1.25
TCF4-249ENST00000625716 TBC1D22BQ9NU19 505 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 SETD4Q9NVD3 440 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 MTMR10Q9NXD2 777 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 PCDHA4Q9UN74 947 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 EMSYQ7Z589 1322 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 TRIOBPQ9H2D6 2365 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 TMEM265A0A087WTH1 108 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 GSTTP1A0A1W2PQM5 241 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 RRN3P2A6NIE6 340 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 KIF28PB7ZC32 967 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 IPO5O00410 1097 aaKnown RBP7.24□□□□□ -1.25
TCF4-249ENST00000625716 MSTNO14793 375 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 ATXN7O15265 892 aaPredicted RBP7.24□□□□□ -1.25
TCF4-249ENST00000625716 TREHO43280 583 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 CAND2O75155 1236 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 BAIAP3O94812 1187 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 MAPTP10636 758 aaKnown RBP7.24□□□□□ -1.25
TCF4-249ENST00000625716 EPXP11678 715 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 SKIP12755 728 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 ATP2A2P16615 1042 aaKnown RBP7.24□□□□□ -1.25
TCF4-249ENST00000625716 STAT5BP51692 787 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 USP11P51784 963 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 AK2P54819 239 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 ACTR2P61160 394 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 IGBP1P78318 339 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 RBL2Q08999 1139 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 SCRN1Q12765 414 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 IKBKEQ14164 716 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 PRR16Q569H4 304 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 ZNF618Q5T7W0 954 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 MIS18BP1Q6P0N0 1132 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 CNKSR3Q6P9H4 555 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 SERINC5Q86VE9 423 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 TRIM50Q86XT4 487 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 BLIDQ8IZY5 108 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 RASGRP4Q8TDF6 673 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 ADAMTS19Q8TE59 1207 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 ZDHHC1Q8WTX9 485 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 SLC28A3Q9HAS3 691 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 UPF2Q9HAU5 1272 aaKnown RBP7.24□□□□□ -1.25
TCF4-249ENST00000625716 BRMS1Q9HCU9 246 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
TCF4-249ENST00000625716 TPCN1Q9ULQ1 816 aa7.24□□□□□ -1.25
TCF4-249ENST00000625716 SCN10AQ9Y5Y9 1956 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 CCDC194A0A1B0GVG4 234 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 GRXCR1A8MXD5 290 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 FAM86B1E9PN63 330 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 M0QZ92 97 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 MARCH6O60337 910 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 EFCAB14O75071 495 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 LGR5O75473 907 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 RPLP2P05387 115 aaKnown RBP7.23□□□□□ -1.25
TCF4-249ENST00000625716 PSAPP07602 524 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 FAM86B2P0C5J1 330 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 ARAFP10398 606 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 SLC26A2P50443 739 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 EPHA4P54764 986 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 ITGB3BPQ13352 177 aaPredicted RBP7.23□□□□□ -1.25
TCF4-249ENST00000625716 TRIM29Q14134 588 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 NONOQ15233 471 aaKnown RBP eCLIP7.23□□□□□ -1.25
TCF4-249ENST00000625716 GRIK4Q16099 956 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 TAF2Q6P1X5 1199 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 FIGNL1Q6PIW4 674 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 PLPPR4Q7Z2D5 763 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 CKAP2LQ8IYA6 745 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 SMAP1Q8IYB5 467 aaPredicted RBP7.23□□□□□ -1.25
TCF4-249ENST00000625716 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
TCF4-249ENST00000625716 PHOSPHO2Q8TCD6 241 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 TBCKQ8TEA7 893 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 LMBR1Q8WVP7 490 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 SEPT8Q92599 483 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 DHX38Q92620 1227 aaKnown RBP7.23□□□□□ -1.25
TCF4-249ENST00000625716 UIMC1Q96RL1 719 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 CTAGE1Q96RT6 745 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 SLC9A7Q96T83 725 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 CDX2Q99626 313 aaPredicted RBP7.23□□□□□ -1.25
TCF4-249ENST00000625716 PBX4Q9BYU1 374 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 ZNF576Q9H609 170 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 ZNF302Q9NR11 478 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 ORC3Q9UBD5 711 aaPredicted RBP7.23□□□□□ -1.25
TCF4-249ENST00000625716 TUBE1Q9UJT0 475 aa7.23□□□□□ -1.25
TCF4-249ENST00000625716 MKL2Q9ULH7 1088 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms