RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 DARSP14868 501 aaKnown RBP16.6■□□□□ 0.25
PNKP-218ENST00000625299 ID4P47928 161 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 CLCN5P51795 746 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 PRR16Q569H4 304 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
PNKP-218ENST00000625299 LINC01465Q8N7H1 131 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 ACSF2Q96CM8 615 aaPredicted RBP16.6■□□□□ 0.25
PNKP-218ENST00000625299 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 CYP26B1Q9NR63 512 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 USTQ9Y2C2 406 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 INPP5FQ9Y2H2 1132 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 DCHS1Q96JQ0 3298 aa16.6■□□□□ 0.25
PNKP-218ENST00000625299 CYP3A4P08684 503 aa16.59■□□□□ 0.25
PNKP-218ENST00000625299 PRKCEQ02156 737 aa16.59■□□□□ 0.25
PNKP-218ENST00000625299 FUT2Q10981 343 aa16.59■□□□□ 0.25
PNKP-218ENST00000625299 LPPQ93052 612 aa16.59■□□□□ 0.25
PNKP-218ENST00000625299 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
PNKP-218ENST00000625299 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
PNKP-218ENST00000625299 WDR64B1ANS9 1081 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 ADAMTS3O15072 1205 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 CHMP2AO43633 222 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 PI15O43692 258 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 CTSAP10619 480 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 RNASELQ05823 741 aaKnown RBP16.58■□□□□ 0.24
PNKP-218ENST00000625299 TBC1D8BQ0IIM8 1120 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
PNKP-218ENST00000625299 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 ERMP1Q7Z2K6 904 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 BCL7CQ8WUZ0 217 aaPredicted RBP16.58■□□□□ 0.24
PNKP-218ENST00000625299 CRYGNQ8WXF5 182 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 SFXN1Q9H9B4 322 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 NRBP2Q9NSY0 501 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 C2orf16Q68DN1 1984 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 GVINP1Q7Z2Y8 2422 aa16.58■□□□□ 0.24
PNKP-218ENST00000625299 KLF18A0A0U1RQI7 1052 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 ZNF862O60290 1169 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 SSBP05455 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
PNKP-218ENST00000625299 AOC1P19801 751 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 CDC27P30260 824 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 PHKA2P46019 1235 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 TDGQ13569 410 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 GIT2Q14161 759 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 ANGPT1Q15389 498 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 UGCGQ16739 394 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 OTOP3Q7RTS5 596 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 DDX53Q86TM3 631 aaKnown RBP16.57■□□□□ 0.24
PNKP-218ENST00000625299 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 SIX5Q8N196 739 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
PNKP-218ENST00000625299 ZNF710Q8N1W2 664 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 IGSF21Q96ID5 467 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 GCOM2Q9BZD3 368 aaPredicted RBP16.57■□□□□ 0.24
PNKP-218ENST00000625299 C6orf50Q9HD87 102 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 DISC1Q9NRI5 854 aa16.57■□□□□ 0.24
PNKP-218ENST00000625299 PIN4Q9Y237 131 aaKnown RBP16.57■□□□□ 0.24
PNKP-218ENST00000625299 STK25O00506 426 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 NPR3P17342 541 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 RFX1P22670 979 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 KLRC2P26717 231 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
PNKP-218ENST00000625299 DRP2Q13474 957 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 PFKFB3Q16875 520 aaPredicted RBP16.56■□□□□ 0.24
PNKP-218ENST00000625299 GLB1LQ6UWU2 654 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 GPR149Q86SP6 731 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 PPFIBP1Q86W92 1011 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 NRDE2Q9H7Z3 1164 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 TBC1D13Q9NVG8 400 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 SEPT9Q9UHD8 586 aaPredicted RBP16.56■□□□□ 0.24
PNKP-218ENST00000625299 DUSP12Q9UNI6 340 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 IRAK3Q9Y616 596 aa16.56■□□□□ 0.24
PNKP-218ENST00000625299 MEIS3P2A8K0S8 358 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 GALTP07902 379 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
PNKP-218ENST00000625299 SLC11A1P49279 550 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 MTERF2Q49AM1 385 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 NOMO2Q5JPE7 1267 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 RTP3Q9BQQ7 232 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 EMILIN2Q9BXX0 1053 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 KCNK12Q9HB15 430 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 CHST12Q9NRB3 414 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
PNKP-218ENST00000625299 DNAJB4Q9UDY4 337 aa16.55■□□□□ 0.24
PNKP-218ENST00000625299 A0A087WZ62 844 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
PNKP-218ENST00000625299 GAS7O60861 476 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 CFHP08603 1231 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 FGD1P98174 961 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
PNKP-218ENST00000625299 GJA10Q969M2 543 aa16.54■□□□□ 0.24
PNKP-218ENST00000625299 SH2D3AQ9BRG2 576 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms