RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MTERF2Q49AM1 385 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 CCDC40Q4G0X9 1142 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 VWA3BQ502W6 1294 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 TMEM63BQ5T3F8 832 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 FAM160B1Q5W0V3 765 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 TAPT1Q6NXT6 567 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 DPP9Q86TI2 863 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 DHX37Q8IY37 1157 aaKnown RBP11.36□□□□□ -0.59
ATRX-216ENST00000624403 TC2NQ8N9U0 490 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 AFAP1L1Q8TED9 768 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 COPS5Q92905 334 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 GPR20Q99678 358 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 TMX1Q9H3N1 280 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
ATRX-216ENST00000624403 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
ATRX-216ENST00000624403 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.36□□□□□ -0.594e-8■■■■■ 31.1
ATRX-216ENST00000624403 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
ATRX-216ENST00000624403 RBM47A0AV96 593 aaKnown RBP11.35□□□□□ -0.59
ATRX-216ENST00000624403 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 CLIC2O15247 247 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 GPR37O15354 613 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 SLC16A4O15374 487 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 MFAP3LO75121 409 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 LGR5O75473 907 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 DGAT1O75907 488 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 GYPCP04921 128 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 DNAJB2P25686 324 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 STAT5BP51692 787 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 MARSP56192 900 aaKnown RBP11.35□□□□□ -0.59
ATRX-216ENST00000624403 PEX3P56589 373 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 SOX10P56693 466 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 ALCAMQ13740 583 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 TRIM14Q14142 442 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 NFIL3Q16649 462 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 TJAP1Q5JTD0 557 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 FKBP15Q5T1M5 1219 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 SMC1BQ8NDV3 1235 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 MCPH1Q8NEM0 835 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 CPLX3Q8WVH0 158 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 BSNDQ8WZ55 320 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 KIFAP3Q92845 792 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 SPATA33Q96N06 139 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 NIFKQ9BYG3 293 aaKnown RBP11.35□□□□□ -0.59
ATRX-216ENST00000624403 KATNBL1Q9H079 304 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 NDST4Q9H3R1 872 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 XPNPEP1Q9NQW7 623 aa11.35□□□□□ -0.59
ATRX-216ENST00000624403 ABT1Q9ULW3 272 aaKnown RBP11.35□□□□□ -0.59
ATRX-216ENST00000624403 NOP56O00567 594 aaKnown RBP11.34□□□□□ -0.59
ATRX-216ENST00000624403 SLC16A3O15427 465 aaKnown RBP11.34□□□□□ -0.59
ATRX-216ENST00000624403 SNAI1O95863 264 aaPredicted RBP11.34□□□□□ -0.59
ATRX-216ENST00000624403 RPL13P26373 211 aaKnown RBP11.34□□□□□ -0.59
ATRX-216ENST00000624403 NPTX2P47972 431 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 KLK7P49862 253 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 FXR1P51114 621 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATRX-216ENST00000624403 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 INHBEP58166 350 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 ARHGAP1Q07960 439 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 NOLC1Q14978 699 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATRX-216ENST00000624403 EMC2Q15006 297 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 SYCP1Q15431 976 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 HSDL1Q3SXM5 330 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 MAMDC4Q6UXC1 1216 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 HAUS6Q7Z4H7 955 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 TMEM139Q8IV31 216 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 CCDC112Q8NEF3 446 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 MAML3Q96JK9 1138 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 PANX2Q96RD6 677 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 ERGIC2Q96RQ1 377 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 CEP89Q96ST8 783 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 GBP3Q9H0R5 595 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 POLR3FQ9H1D9 316 aaPredicted RBP11.34□□□□□ -0.59
ATRX-216ENST00000624403 ST6GALNAC4Q9H4F1 302 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 AZI2Q9H6S1 392 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 AGPAT3Q9NRZ7 376 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 SPTLC3Q9NUV7 552 aa11.34□□□□□ -0.59
ATRX-216ENST00000624403 ZNFX1Q9P2E3 1918 aaKnown RBP11.33□□□□□ -0.6
ATRX-216ENST00000624403 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 RNF225M0QZC1 329 aaPredicted RBP11.33□□□□□ -0.6
ATRX-216ENST00000624403 NRDCO43847 1150 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 AKAP3O75969 853 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 TPM1P09493 284 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 CASP14P31944 242 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 RFC5P40937 340 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 CASP4P49662 377 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
ATRX-216ENST00000624403 RTP1P59025 263 aa11.33□□□□□ -0.6
ATRX-216ENST00000624403 GTF2BQ00403 316 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms