RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 LOC102724428A0A0B4J2F2 783 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 DDX39AO00148 427 aaKnown RBP12.67□□□□□ -0.38
ATRX-214ENST00000624166 CASQ2O14958 399 aaPredicted RBP12.67□□□□□ -0.38
ATRX-214ENST00000624166 SIK1P57059 783 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 C12orf60Q5U649 245 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
ATRX-214ENST00000624166 CPVLQ9H3G5 476 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 CREB3O43889 395 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 SCP2P22307 547 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 NPEPPSP55786 919 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 KAZNQ674X7 775 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 SEMA6BQ9H3T3 888 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 GGT7Q9UJ14 662 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 ZNF233A6NK53 670 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 O00370 1275 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 PLS3P13797 630 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 ITIH2P19823 946 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 TRIM59Q8IWR1 403 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 SEL1LQ9UBV2 794 aa12.67□□□□□ -0.38
ATRX-214ENST00000624166 REXO2Q9Y3B8 237 aaKnown RBP12.67□□□□□ -0.38
ATRX-214ENST00000624166 TMEM120BA0PK00 339 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 POLR2MP0CAP2 368 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 ZNF844Q08AG5 666 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 RCN2Q14257 317 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 ZNF564Q8TBZ8 553 aaPredicted RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 MIEF2Q96C03 454 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 FAM20AQ96MK3 541 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 SGK1O00141 431 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 EARS2Q5JPH6 523 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 CEP120Q8N960 986 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 NSUN4Q96CB9 384 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 SERPINB13Q9UIV8 391 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 MINPP1Q9UNW1 487 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 NWD1Q149M9 1564 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 DLG5Q8TDM6 1919 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 TCRBV5S4A2TA0A5A2 114 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 F8VZ95 297 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 ABL1P00519 1130 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 FECHP22830 423 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 SERPINB6P35237 376 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 NME8Q8N427 588 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 FGD4Q96M96 766 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 TMOD4Q9NZQ9 345 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 CNOT8Q9UFF9 292 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
ATRX-214ENST00000624166 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
ATRX-214ENST00000624166 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 H0YCG3 227 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 ZBTB5O15062 677 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 CYP19A1P11511 503 aaPredicted RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 ACTN1P12814 892 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 SLC9A1P19634 815 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 MAPK7Q13164 816 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 CYFIP1Q7L576 1253 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 PROCA1Q8NCQ7 364 aaPredicted RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 C1orf131Q8NDD1 294 aaKnown RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 DTNBP1Q96EV8 351 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 A0A0A6YYK5 440 aaPredicted RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 A0A0G2JND7 137 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 IQANK1A0A1B0GTG1 560 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 ESYT2A0FGR8 921 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 CAND2O75155 1236 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 SLC16A2P36021 539 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 ERVK-9P63128 1117 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 CLEC4GQ6UXB4 293 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 STAMBPL1Q96FJ0 436 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 ANAPC7Q9UJX3 599 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 HNRNPH3P31942 346 aaKnown RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.38
ATRX-214ENST00000624166 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
ATRX-214ENST00000624166 KCTD1Q719H9 257 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 IQCKQ8N0W5 287 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 KIF2BQ8N4N8 673 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 PYROXD1Q8WU10 500 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 DNAJC9Q8WXX5 260 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 OLFM3Q96PB7 478 aa12.65□□□□□ -0.38
ATRX-214ENST00000624166 WDR91A4D1P6 747 aa12.65□□□□□ -0.39
ATRX-214ENST00000624166 PPFIA2O75334 1257 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms