RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CALML3P27482 149 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-204ENST00000623364 POLGP54098 1239 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-204ENST00000623364 MGAT3Q09327 533 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 PKDCCQ504Y2 493 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 TOGARAM2Q6ZUX3 1019 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 TMPRSS7Q7RTY8 843 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 SLC39A11Q8N1S5 342 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 DNASE1L2Q92874 299 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 TMEM169Q96HH4 297 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 KXD1Q9BQD3 176 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 TUT1Q9H6E5 874 aaKnown RBP7.62□□□□□ -1.19
CDKL5-204ENST00000623364 SETD4Q9NVD3 440 aa7.62□□□□□ -1.19
CDKL5-204ENST00000623364 ISY1Q9ULR0 285 aaKnown RBP7.62□□□□□ -1.19
CDKL5-204ENST00000623364 PATE3B3GLJ2 98 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 ZMYND10O75800 440 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 UQCRFS1P1P0C7P4 283 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 FSHRP23945 695 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 STAT2P52630 851 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 IKQ13123 557 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-204ENST00000623364 PAK2Q13177 524 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 PTGDRQ13258 359 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 TAF2Q6P1X5 1199 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 LRRC43Q8N309 656 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 DNERQ8NFT8 737 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 DYNLL2Q96FJ2 89 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 NEUROD6Q96NK8 337 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 DNAJC2Q99543 621 aaKnown RBP7.61□□□□□ -1.19
CDKL5-204ENST00000623364 C16orf70Q9BSU1 422 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 NUSAP1Q9BXS6 441 aaKnown RBP7.61□□□□□ -1.19
CDKL5-204ENST00000623364 ATP6V0A4Q9HBG4 840 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 CCPG1Q9ULG6 757 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 SQORQ9Y6N5 450 aa7.61□□□□□ -1.19
CDKL5-204ENST00000623364 SVILO95425 2214 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 FGFR1P11362 822 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 PXNP49023 591 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 RARSP54136 660 aaKnown RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 ATXN3P54252 364 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 NFATC3Q12968 1075 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 LRRC55Q6ZSA7 311 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 FAM43BQ6ZT52 329 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 CYP2U1Q7Z449 544 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 ZC3H18Q86VM9 953 aaKnown RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 PLEKHM2Q8IWE5 1019 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 GALNT15Q8N3T1 639 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 CHURC1Q8WUH1 139 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 TMEM117Q9H0C3 514 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 C1orf112Q9NSG2 853 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 PLEKHB1Q9UF11 243 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 EVLQ9UI08 416 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-204ENST00000623364 PADI3Q9ULW8 664 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 CDY2AQ9Y6F7 541 aa7.6□□□□□ -1.19
CDKL5-204ENST00000623364 NID2Q14112 1375 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 DENND3A2RUS2 1198 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 TMEM232C9JQI7 657 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 E9PAM4 449 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 HOXA2O43364 376 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 OPHN1O60890 802 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 RFPL2O75678 378 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 C8AP07357 584 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 KRT10P13645 584 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 HLA-EP13747 358 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 ENGP17813 658 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 METAP2P50579 478 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 KARSQ15046 597 aaKnown RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 MAPK6Q16659 721 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 PREPLQ4J6C6 727 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 TRIM61Q5EBN2 209 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 ZNF746Q6NUN9 644 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 SLC24A5Q71RS6 500 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 DDX53Q86TM3 631 aaKnown RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 FAM160B2Q86V87 743 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 ABI1Q8IZP0 508 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 FAM26EQ8N5C1 309 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 ZNF707Q96C28 371 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 SPATA33Q96N06 139 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 PI4K2AQ9BTU6 479 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 REPIN1Q9BWE0 567 aaKnown RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 NYAP2Q9P242 653 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-204ENST00000623364 OTOGQ6ZRI0 2925 aa7.59□□□□□ -1.19
CDKL5-204ENST00000623364 FANCIQ9NVI1 1328 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 KNTC1P50748 2209 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 KAT6AQ92794 2004 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CLEC18AA5D8T8 446 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CNPP09543 421 aaKnown RBP7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CYP2D6P10635 497 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 GRNP28799 593 aaKnown RBP7.58□□□□□ -1.2
CDKL5-204ENST00000623364 HOXC13P31276 330 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 GBP1P32455 592 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CDK8P49336 464 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 MRPS6P82932 125 aaKnown RBP7.58□□□□□ -1.2
CDKL5-204ENST00000623364 TLE3Q04726 772 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 IER5Q5VY09 327 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CLEC18BQ6UXF7 455 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 SLC30A10Q6XR72 485 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 RNF207Q6ZRF8 634 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 Q6ZS52 159 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CLEC18CQ8NCF0 446 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms