RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GORASP1Q9BQQ3 440 aa6.34□□□□□ -1.39
CPNE3-213ENST00000622183 TACO1Q9BSH4 297 aaKnown RBP6.34□□□□□ -1.39
CPNE3-213ENST00000622183 GTPBP4Q9BZE4 634 aaKnown RBP6.34□□□□□ -1.39
CPNE3-213ENST00000622183 KCND1Q9NSA2 647 aa6.34□□□□□ -1.39
CPNE3-213ENST00000622183 MBD1Q9UIS9 605 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-213ENST00000622183 NRP2O60462 931 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 SEC24DO94855 1032 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-213ENST00000622183 TRIM27P14373 513 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 JUNBP17275 347 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-213ENST00000622183 WASP42768 502 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 NCKAP1LP55160 1127 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 RHBDL3P58872 404 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 CD83Q01151 205 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 HDAC1Q13547 482 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-213ENST00000622183 ZNF267Q14586 743 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-213ENST00000622183 RTP5Q14D33 572 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 DGKDQ16760 1214 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 BTNL9Q6UXG8 535 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 KSR2Q6VAB6 950 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 USP45Q70EL2 814 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 MZB1Q8WU39 189 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 MAP3K14Q99558 947 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 CHMP4AQ9BY43 222 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 EPB41L4BQ9H329 900 aa6.33□□□□□ -1.4
CPNE3-213ENST00000622183 ARID4BQ4LE39 1312 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 TEX51A0A1B0GUA7 166 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 CTNND1O60716 968 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 CHGBP05060 677 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 PDCP20941 246 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 CCT2P78371 535 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 MUM1L1Q5H9M0 696 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 PHF19Q5T6S3 580 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 GRAMD4Q6IC98 578 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 CYB5RLQ6IPT4 315 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 IGDCC3Q8IVU1 814 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 GLB1L2Q8IW92 636 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 PRR18Q8N4B5 295 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 TTLL6Q8N841 843 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 DIS3LQ8TF46 1054 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 FBXO41Q8TF61 875 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 PAWRQ96IZ0 340 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 FDXACB1Q9BRP7 624 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 C11orf84Q9BUA3 381 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 SARGQ9BW04 601 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 ZNF700Q9H0M5 742 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 NSUN3Q9H649 340 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 DCP1AQ9NPI6 582 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 FAM53CQ9NYF3 392 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 DDX20Q9UHI6 824 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 SAP30BPQ9UHR5 308 aaKnown RBP6.32□□□□□ -1.4
CPNE3-213ENST00000622183 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 SYNPO2Q9UMS6 1093 aa6.32□□□□□ -1.4
CPNE3-213ENST00000622183 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-213ENST00000622183 A0A0A6YYK5 440 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-213ENST00000622183 DTNBO60941 627 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 SEMA7AO75326 666 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 XPAP23025 273 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-213ENST00000622183 MCAMP43121 646 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 NRG3P56975 720 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 GALEQ14376 348 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 CHST15Q7LFX5 561 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-213ENST00000622183 GRAMD1CQ8IYS0 662 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 LINC00482Q8N8I6 264 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 KYQ8NBH2 561 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 GLB1L3Q8NCI6 653 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-213ENST00000622183 PPP1R14CQ8TAE6 165 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 MVB12AQ96EY5 273 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 DYDC2Q96IM9 177 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-213ENST00000622183 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 SOX7Q9BT81 388 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 MCOLN1Q9GZU1 580 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 GREM2Q9H772 168 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 FBXO10Q9UK96 956 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 IPPQ9Y573 584 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 CARMIL2Q6F5E8 1435 aa6.31□□□□□ -1.4
CPNE3-213ENST00000622183 CCDC154A6NI56 674 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 H3BML4 177 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 N4BP3O15049 544 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 HTRA2O43464 458 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-213ENST00000622183 CYP7B1O75881 506 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 KNG1P01042 644 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 EDNRBP24530 442 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 EPHB3P54753 998 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 FOXO4P98177 505 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 TMEM200BQ69YZ2 307 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 PPP4R4Q6NUP7 873 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 PRR23BQ6ZRT6 265 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 STK32CQ86UX6 486 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 PMM1Q92871 262 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 C1GALT1C1Q96EU7 318 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 SLC39A13Q96H72 371 aa6.3□□□□□ -1.4
CPNE3-213ENST00000622183 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms