RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 ASTE1Q2TB18 679 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 DNAJC19Q96DA6 116 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 PABPC3Q9H361 631 aaKnown RBP12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 AIPL1Q9NZN9 384 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 GOLGA8IPA6NC78 632 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 GOLGA8JA6NMD2 632 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 LCA5LO95447 670 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 MIEF2Q96C03 454 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 BCAS3Q9H6U6 928 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 PARP2Q9UGN5 583 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 ALG6Q9Y672 507 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 ARHGEF35A5YM69 484 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 SPAG7O75391 227 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 SOX5P35711 763 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 MTM1Q13496 603 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 SEPT2Q15019 361 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 MTMR9Q96QG7 549 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 TGS1Q96RS0 853 aaKnown RBP12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 LRRC4CQ9HCJ2 640 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 TAS2R14Q9NYV8 317 aa12.28□□□□□ -0.44
PCDHGA11-203ENST00000622044 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 K7ENM7 598 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 RASSF9O75901 435 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 IFNB1P01574 187 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 DRD4P21917 467 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 ARHGAP4P98171 946 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 KAZNQ674X7 775 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 CCDC174Q6PII3 467 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 CATSPER3Q86XQ3 398 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 KIAA0825Q8IV33 1275 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 SCFD2Q8WU76 684 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 ARHGEF26Q96DR7 871 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 VPS37BQ9H9H4 285 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 SUCLA2Q9P2R7 463 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 SLC12A6Q9UHW9 1150 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 TRIM33Q9UPN9 1127 aa12.27□□□□□ -0.44
PCDHGA11-203ENST00000622044 ZBTB5O15062 677 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 GDF11O95390 407 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 CTNNA2P26232 953 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 ATP5DP30049 168 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 MARCKSL1P49006 195 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 COG2Q14746 738 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 KYNUQ16719 465 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 DOK7Q18PE1 504 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 MTMR4Q9NYA4 1195 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 DCCP43146 1447 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 ABCB11O95342 1321 aa12.27□□□□□ -0.45
PCDHGA11-203ENST00000622044 SP4Q02446 784 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 DDR1Q08345 913 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 SF3B3Q15393 1217 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 GNPTABQ3T906 1256 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 IRF2BP2Q7Z5L9 587 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 RPUSD2Q8IZ73 545 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 KRT35Q92764 455 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 C9orf72Q96LT7 481 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 RUSC1Q9BVN2 902 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 PITPNM3Q9BZ71 974 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 GANQ9H2C0 597 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 TYW1Q9NV66 732 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 CTNNAL1Q9UBT7 734 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 MCM8Q9UJA3 840 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 INTUQ9ULD6 942 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 A8MUI8 341 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 CLDN3O15551 220 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 FGRP09769 529 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 MAPK7Q13164 816 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 PPP2R5EQ16537 467 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 CAPRIN2Q6IMN6 1127 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 FRMD5Q7Z6J6 570 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 AGAP11Q8TF27 550 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 ATG4AQ8WYN0 398 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 POP1Q99575 1024 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 USP15Q9Y4E8 981 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 GAS7O60861 476 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 GAS8O95995 478 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 ATF2P15336 505 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 GBP1P32455 592 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 SSTR3P32745 418 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 MUM1Q2TAK8 710 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 C2CD6Q53TS8 623 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 SLC30A5Q8TAD4 765 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 SLC20A1Q8WUM9 679 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 HAS1Q92839 578 aa12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 INTS2Q9H0H0 1204 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-203ENST00000622044 ACP6Q9NPH0 428 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms