RNA–Protein interactions for RNA: ENST00000621840.4

TDRD3-209, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-209ENST00000621840 TSPY2A6NKD2 308 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 AFPP02771 609 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 SKIP12755 728 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 VHLP40337 213 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 HADHBP55084 474 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 JAM2P57087 298 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 PPATQ06203 517 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 CALCRLQ16602 461 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 KRT79Q5XKE5 535 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 DPY19L2P1Q6NXN4 242 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 VSTM1Q6UX27 236 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 ARHGEF2Q92974 986 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 UTP4Q969X6 686 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 TGS1Q96RS0 853 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 NUDCD1Q96RS6 583 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 MXD3Q9BW11 206 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 CRNKL1Q9BZJ0 848 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 CCDC113Q9H0I3 377 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 DCLRE1BQ9H816 532 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 CHCHD3Q9NX63 227 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 PDP2Q9P2J9 529 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 LGALS13Q9UHV8 139 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 TRMT112Q9UI30 125 aaKnown RBP8.47□□□□□ -1.05
TDRD3-209ENST00000621840 USP20Q9Y2K6 914 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 SLC4A7Q9Y6M7 1214 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 USH1CQ9Y6N9 552 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 PASKQ96RG2 1323 aa8.47□□□□□ -1.05
TDRD3-209ENST00000621840 GTPBP10A4D1E9 387 aaKnown RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 SMIM23A6NLE4 172 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 NVLO15381 856 aaKnown RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 STARD3NLO95772 234 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 CTNNA2P26232 953 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 OCRLQ01968 901 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 KCNH2Q12809 1159 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 MUM1Q2TAK8 710 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 TBC1D25Q3MII6 688 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 ZNF568Q3ZCX4 644 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 LRRC23Q53EV4 343 aaPredicted RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 C11orf63Q6NUN7 778 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 DYMQ7RTS9 669 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 HELBQ8NG08 1087 aaPredicted RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 ZCRB1Q8TBF4 217 aaKnown RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 ART4Q93070 314 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 FAM136AQ96C01 138 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 RMDN2Q96LZ7 410 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 FGD4Q96M96 766 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 MTMR9Q96QG7 549 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 ORAI2Q96SN7 254 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 SEMA4AQ9H3S1 761 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 GOLPH3Q9H4A6 298 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 TLE6Q9H808 572 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 DMAP1Q9NPF5 467 aaPredicted RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 NKIRAS1Q9NYS0 192 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 NKX1-2Q9UD57 310 aaPredicted RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 ARMCX3Q9UH62 379 aaPredicted RBP8.46□□□□□ -1.05
TDRD3-209ENST00000621840 HDAC9Q9UKV0 1011 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 SNX24Q9Y343 169 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 STARD13Q9Y3M8 1113 aa8.46□□□□□ -1.05
TDRD3-209ENST00000621840 CYP2D7A0A087X1C5 515 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 ERVV-1B6SEH8 477 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 USP17L12C9JPN9 530 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 USP17L21D6R901 530 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 MAPK13O15264 365 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 SLC16A3O15427 465 aaKnown RBP8.46□□□□□ -1.06
TDRD3-209ENST00000621840 STX2P32856 288 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 BCAMP50895 628 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 NAPAP54920 295 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 SNX1Q13596 522 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 TCEAL1Q15170 157 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 CYP1B1Q16678 543 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 GSTA3Q16772 222 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 EXOC3L4Q17RC7 722 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 OR52E8Q6IFG1 317 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 VSIG1Q86XK7 387 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 ECHDC2Q86YB7 292 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 UBL4BQ8N7F7 174 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
TDRD3-209ENST00000621840 FAM13CQ8NE31 585 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 MORC4Q8TE76 937 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 SNX29Q8TEQ0 813 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 CTNNBL1Q8WYA6 563 aaPredicted RBP8.46□□□□□ -1.06
TDRD3-209ENST00000621840 DNAJC19Q96DA6 116 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 ZNF333Q96JL9 665 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 RPS6KC1Q96S38 1066 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 SYT15Q9BQS2 421 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 VCX3BQ9H321 246 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 METTL14Q9HCE5 456 aaKnown RBP8.46□□□□□ -1.06
TDRD3-209ENST00000621840 VCX3AQ9NNX9 186 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 LARSQ9P2J5 1176 aaKnown RBP8.46□□□□□ -1.06
TDRD3-209ENST00000621840 MAD2L2Q9UI95 211 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 SH3BP1Q9Y3L3 701 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 PFASO15067 1338 aa8.46□□□□□ -1.06
TDRD3-209ENST00000621840 WNK3Q9BYP7 1800 aa8.45□□□□□ -1.06
TDRD3-209ENST00000621840 DDX3XO00571 662 aaKnown RBP eCLIP8.45□□□□□ -1.06
TDRD3-209ENST00000621840 PENKP01210 267 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms