RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 GCNAQ96QF7 691 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PA2G4Q9UQ80 394 aaKnown RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PRR23AA6NEV1 266 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 MYO1DO94832 1006 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ZNF594Q96JF6 807 aaPredicted RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 TMEM206Q9H813 350 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ETNK1Q9HBU6 452 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 FANCLQ9NW38 375 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 KBTBD13C9JR72 458 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 KCNA3P22001 575 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 SLC1A4P43007 532 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 KRT33BQ14525 404 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 KRT72Q14CN4 511 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 FRA10AC1Q70Z53 315 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 TTC17Q96AE7 1141 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 NLRP4Q96MN2 994 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 TESK2Q96S53 571 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 MAST1Q9Y2H9 1570 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 WDR17Q8IZU2 1322 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 A0A1W2PP64 1363 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PARD3Q8TEW0 1356 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 A0A0G2JND7 137 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FAM187AA6NFU0 413 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 RASA4BC9J798 803 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 RASA4O43374 803 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 PFKFB2O60825 505 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 DDAH1O94760 285 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FAM107AO95990 144 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 CCNA1P78396 465 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TBC1D9BQ66K14 1250 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SYDE1Q6ZW31 735 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 GDAP1Q8TB36 358 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SNX19Q92543 992 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ATP6V1G3Q96LB4 118 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FAM129AQ9BZQ8 928 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 POLR3EQ9NVU0 708 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ARPP21Q9UBL0 812 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ADAM30Q9UKF2 790 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 MTRF1O75570 445 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SEC31AO94979 1220 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 MBD4O95243 580 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 CFBP00751 764 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 PMLP29590 882 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 PIK3CAP42336 1068 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FBXW4P57775 412 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 WLSQ5T9L3 541 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 DARS2Q6PI48 645 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 RINLQ6ZS11 566 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SRLQ86TD4 932 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 KBTBD3Q8NAB2 608 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FAM161BQ96MY7 647 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ABCB6Q9NP58 842 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 C16orf72Q14CZ0 275 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 CCDC85BQ15834 202 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ARL13BQ3SXY8 428 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ARHGEF16Q5VV41 709 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 CYP4F22Q6NT55 531 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 VSTM4Q8IW00 320 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SYNE4Q8N205 404 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 RTL3Q8N8U3 475 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 GRXCR2A6NFK2 248 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TK2O00142 265 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 PDE5AO76074 875 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FOSP01100 380 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 KRT1P04264 644 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 BCAMP50895 628 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FKBP3Q00688 224 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 DMPKQ09013 629 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FAM26FQ5R3K3 315 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FBXO38Q6PIJ6 1188 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 CEP68Q76N32 757 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 RBM46Q8TBY0 533 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TGFBRAP1Q8WUH2 860 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 NHEJ1Q9H9Q4 299 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ZFYVE1Q9HBF4 777 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SPATA31A3Q5VYP0 1347 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ABCA8O94911 1581 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 PALLDQ8WX93 1383 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 MAGEA13PA6NCF6 341 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SERPINB3P29508 390 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ARPP19P56211 112 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TFDP1Q14186 410 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ADCK5Q3MIX3 580 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 BEND6Q5SZJ8 279 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SARM1Q6SZW1 724 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 MAPKAPK5Q8IW41 473 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TRMT44Q8IYL2 757 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 EPN3Q9H201 632 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FOXP1Q9H334 677 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 MAPKBP1O60336 1514 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 MESDQ14696 234 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ZNF483Q8TF39 744 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 COPRSQ9NQ92 184 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 CPSF3Q9UKF6 684 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SNTNA6NMZ2 147 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 NDUFA10O95299 355 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 ANP32DO95626 131 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 LRRC63Q05C16 580 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms