RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TBC1D7Q9P0N9 293 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 HDAC6Q9UBN7 1215 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 DACH1Q9UI36 760 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 OGDHLQ9ULD0 1010 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 GDAQ9Y2T3 454 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 CEP350Q5VT06 3117 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 LRRC37A2A6NM11 1700 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 KIAA1217Q5T5P2 1943 aa8.87□□□□□ -0.99
CPNE3-209ENST00000620393 MBLAC1A4D2B0 266 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 KIF20AO95235 890 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SGPL1O95470 568 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 MYCP01106 439 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 GJB1P08034 283 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 GLRA2P23416 452 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 TMOD1P28289 359 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 ERCC5P28715 1186 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 HOXC8P31273 242 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 NPTX2P47972 431 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 ZNF165P49910 485 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SMTNP53814 917 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 PEX3P56589 373 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 ADAM17P78536 824 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 MXD4Q14582 209 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 NFRKBQ6P4R8 1299 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 EPM2AIP1Q7L775 607 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SESTD1Q86VW0 696 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 FAM178BQ8IXR5 827 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SMYD4Q8IYR2 804 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 MYOCDQ8IZQ8 938 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 GUF1Q8N442 669 aaKnown RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 METTL13Q8N6R0 699 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 LINC01465Q8N7H1 131 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 C7orf31Q8N865 590 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SLC17A8Q8NDX2 589 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SCFD1Q8WVM8 642 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 LMBR1Q8WVP7 490 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 PRPF31Q8WWY3 499 aaKnown RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 DHTKD1Q96HY7 919 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 IFT74Q96LB3 600 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 BPIFA3Q9BQP9 254 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 STRA6Q9BX79 667 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 POLR3FQ9H1D9 316 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 ST6GALNAC4Q9H4F1 302 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 RYDENQ9NUL5 291 aaKnown RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 SUCLA2Q9P2R7 463 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-209ENST00000620393 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
CPNE3-209ENST00000620393 GRIN2DO15399 1336 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 SMIM35A0A1B0GVV1 85 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 C17orf102A2RUQ5 167 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 CCDC169A6NNP5 214 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 DNM1LO00429 736 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 CAPN2P17655 700 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 SCP2P22307 547 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 NMT1P30419 496 aaKnown RBP8.85□□□□□ -0.99
CPNE3-209ENST00000620393 GTF2BQ00403 316 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 CDC42EP1Q00587 391 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 PTPN11Q06124 597 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-209ENST00000620393 POU5F1BQ06416 359 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 LAMTOR4Q0VGL1 99 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 DMP1Q13316 513 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-209ENST00000620393 DRP2Q13474 957 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 STIM1Q13586 685 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 ITGA7Q13683 1181 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 ALCAMQ13740 583 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 HIC1Q14526 733 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 IQCB1Q15051 598 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 PPP2R5AQ15172 486 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 BMT2Q1RMZ1 405 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 CENPPQ6IPU0 288 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 C11orf57Q6ZUT1 292 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-209ENST00000620393 STXBP4Q6ZWJ1 553 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 HAUS6Q7Z4H7 955 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 NME8Q8N427 588 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 LRRC71Q8N4P6 559 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 GLIS3Q8NEA6 775 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 ENOX1Q8TC92 643 aaKnown RBP8.85□□□□□ -0.99
CPNE3-209ENST00000620393 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 ASAP3Q8TDY4 903 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 PPP1R13LQ8WUF5 828 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 PSPC1Q8WXF1 523 aaKnown RBP8.85□□□□□ -0.99
CPNE3-209ENST00000620393 BSNDQ8WZ55 320 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 KCNN1Q92952 543 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 ZBTB10Q96DT7 871 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 GLT1D1Q96MS3 346 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 SEZ6LQ9BYH1 1024 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 FGFBP2Q9BYJ0 223 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 RBSNQ9H1K0 784 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 KMT5AQ9NQR1 393 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 MAPK8IP1Q9UQF2 711 aa8.85□□□□□ -0.99
CPNE3-209ENST00000620393 CASP8AP2Q9UKL3 1982 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 SMTNL1A8MU46 457 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 KBTBD13C9JR72 458 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 H0YCG3 227 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 PSMA7O14818 248 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 EIF3DO15371 548 aaKnown RBP eCLIP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms