RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 KLRG1Q96E93 195 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 AS3MTQ9HBK9 375 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 PDE2AO00408 941 aaPredicted RBP21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 MRPS25P82663 173 aaKnown RBP21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 XKR9Q5GH70 373 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 GIMAP7Q8NHV1 300 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 KIFC3Q9BVG8 833 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 EDEM3Q9BZQ6 932 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 EIF3DO15371 548 aaKnown RBP eCLIP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 TACC1O75410 805 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 DDNO94850 711 aaPredicted RBP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 PEX3P56589 373 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 MAP2K1Q02750 393 aaPredicted RBP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 BIRC2Q13490 618 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 METTL14Q9HCE5 456 aaKnown RBP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 EHD2Q9NZN4 543 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 ZNF214Q9UL59 606 aaPredicted RBP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 ODF2LQ9ULJ1 636 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 BRCA1P38398 1863 aaKnown RBP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 LRRN2O75325 713 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 ZMYND10O75800 440 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 USP8P40818 1118 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 CBWD6Q4V339 395 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 CBWD3Q5JTY5 395 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 CBWD5Q5RIA9 395 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 FAM102BQ5T8I3 360 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 DPY19L2P1Q6NXN4 242 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 NFRKBQ6P4R8 1299 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 FAM71BQ8TC56 605 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 COG1Q8WTW3 980 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 TSGA10Q9BZW7 698 aa21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 LARSQ9P2J5 1176 aaKnown RBP21.08■□□□□ 0.97
LAPTM4B-204ENST00000619747 SLC16A4O15374 487 aa21.08■□□□□ 0.96
LAPTM4B-204ENST00000619747 KIAA0753Q2KHM9 967 aa21.08■□□□□ 0.96
LAPTM4B-204ENST00000619747 PAPD7Q5XG87 772 aaKnown RBP21.08■□□□□ 0.96
LAPTM4B-204ENST00000619747 HNRNPLLQ8WVV9 542 aaKnown RBP21.08■□□□□ 0.96
LAPTM4B-204ENST00000619747 TBC1D22BQ9NU19 505 aa21.08■□□□□ 0.96
LAPTM4B-204ENST00000619747 FRMD4BQ9Y2L6 1034 aa21.08■□□□□ 0.96
LAPTM4B-204ENST00000619747 SSU72P8A0A1W2PR75 194 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 LCA5LO95447 670 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 KLRC1P26715 233 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 MATR3P43243 847 aaKnown RBP eCLIP21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 CASP8Q14790 479 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 ZNF571Q7Z3V5 609 aaPredicted RBP21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 APOBEC3FQ8IUX4 373 aaKnown RBP21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 TRIM58Q8NG06 486 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 BORCS6Q96GS4 357 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 CBWD1Q9BRT8 395 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 ZNF112Q9UJU3 913 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 DSG3P32926 999 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 DLG4P78352 724 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 ZNF662Q6ZS27 426 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 SEL1LQ9UBV2 794 aa21.07■□□□□ 0.96
LAPTM4B-204ENST00000619747 PPP1R12BO60237 982 aaPredicted RBP21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 ECM2O94769 699 aaPredicted RBP21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 CCT5P48643 541 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 IRF2BP2Q7Z5L9 587 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 NLRX1Q86UT6 975 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 KCTD17Q8N5Z5 321 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 NUCKS1Q9H1E3 243 aaKnown RBP21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 SLC24A3Q9HC58 644 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 PACSIN2Q9UNF0 486 aaPredicted RBP21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 GOLGA8IPA6NC78 632 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 GOLGA8JA6NMD2 632 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 CCDC169A6NNP5 214 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 VSNL1P62760 191 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 TUBB2AQ13885 445 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 STXBP4Q6ZWJ1 553 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 VSIG10LQ86VR7 867 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 TUBB2BQ9BVA1 445 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 GOLPH3Q9H4A6 298 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 RABEP2Q9H5N1 569 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 SIX2Q9NPC8 291 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 AIPL1Q9NZN9 384 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 TMOD4Q9NZQ9 345 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 FAM169AQ9Y6X4 670 aa21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 RBBP6Q7Z6E9 1792 aaKnown RBP21.06■□□□□ 0.96
LAPTM4B-204ENST00000619747 LTBP3Q9NS15 1303 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 RGS20O76081 388 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 GFPT2O94808 682 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 FSTL1Q12841 308 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 SLC18A3Q16572 532 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 MIEF2Q96C03 454 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 A1CFQ9NQ94 594 aaKnown RBP21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 SLC16A3O15427 465 aaKnown RBP21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 FTCDO95954 541 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 MUTP22033 750 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 C2orf54Q08AI8 447 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 IQCEQ6IPM2 695 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 NIPA1Q7RTP0 329 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 REPS2Q8NFH8 660 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 KCND2Q9NZV8 630 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 GABBR1Q9UBS5 961 aa21.05■□□□□ 0.96
LAPTM4B-204ENST00000619747 WDR64B1ANS9 1081 aa21.04■□□□□ 0.96
LAPTM4B-204ENST00000619747 FMO5P49326 533 aa21.04■□□□□ 0.96
LAPTM4B-204ENST00000619747 ANO5Q75V66 913 aa21.04■□□□□ 0.96
LAPTM4B-204ENST00000619747 HAUS6Q7Z4H7 955 aa21.04■□□□□ 0.96
LAPTM4B-204ENST00000619747 NEK9Q8TD19 979 aa21.04■□□□□ 0.96
LAPTM4B-204ENST00000619747 SYN2Q92777 582 aaPredicted RBP21.04■□□□□ 0.96
LAPTM4B-204ENST00000619747 FAM107BQ9H098 131 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms