RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ABHD15Q6UXT9 468 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 RSPH3Q86UC2 560 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 ADGRF4Q8IZF3 695 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CGNQ9P2M7 1197 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CDV3Q9UKY7 258 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 IQSEC3Q9UPP2 1182 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 HCN4Q9Y3Q4 1203 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CCDC163A0A0D9SF12 145 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 FAM221BA6H8Z2 402 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 ASAP2O43150 1006 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 PRPF3O43395 683 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 MBTPS2O43462 519 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 PRKAB2O43741 272 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 MAN1A2O60476 641 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 PARP1P09874 1014 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 TDGF1P13385 188 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 UBA1P22314 1058 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 RPS9P46781 194 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 JAK3P52333 1124 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 RPS6P62753 249 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 MRPS6P82932 125 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 PTSQ03393 145 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CLN3Q13286 438 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 LAPTM4AQ15012 233 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 SLC35G1Q2M3R5 365 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CDCA2Q69YH5 1023 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 ZNF787Q6DD87 383 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 MFSD6Q6ZSS7 791 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 EP400NLQ6ZTU2 488 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CASP10Q92851 521 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 DYNLL2Q96FJ2 89 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 LSG1Q9H089 658 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 MKNK2Q9HBH9 465 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 TMEM51Q9NW97 253 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 KCNG1Q9UIX4 513 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 FBXO4Q9UKT5 387 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 ZBTB42B2RXF5 422 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 C9IYK1 514 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 HBP1O60381 514 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 PPP1R11O60927 126 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 LGALS2P05162 132 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 MTHFRP42898 656 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 KRT76Q01546 638 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CENPCQ03188 943 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 SIGLEC14Q08ET2 396 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 RAB3GAP1Q15042 981 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 SHROOM1Q2M3G4 852 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 EML3Q32P44 896 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 GDF6Q6KF10 455 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 DDX53Q86TM3 631 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 LEMD2Q8NC56 503 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 SLC17A8Q8NDX2 589 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 BICD2Q8TD16 824 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 ZDHHC1Q8WTX9 485 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CCDC12Q8WUD4 166 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 RNF26Q9BY78 433 aaPredicted RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 ADAMTS10Q9H324 1103 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 CWH43Q9H720 699 aa6.17□□□□□ -1.42
CBWD3-215ENST00000619322 SAP30BPQ9UHR5 308 aaKnown RBP6.17□□□□□ -1.42
CBWD3-215ENST00000619322 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.16□□□□□ -1.42
CBWD3-215ENST00000619322 GCOM1H8Y6P7 765 aaPredicted RBP6.16□□□□□ -1.42
CBWD3-215ENST00000619322 DHX15O43143 795 aaKnown RBP6.16□□□□□ -1.42
CBWD3-215ENST00000619322 POLR2MP0CAP2 368 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 ZXDAP98168 799 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 PRKG1Q13976 671 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 ANKRD35Q8N283 1001 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 MXRA8Q9BRK3 442 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 TMEM117Q9H0C3 514 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 ERAP1Q9NZ08 941 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 COL20A1Q9P218 1284 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 COL27A1Q8IZC6 1860 aaPredicted RBP6.16□□□□□ -1.42
CBWD3-215ENST00000619322 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.16□□□□□ -1.42
CBWD3-215ENST00000619322 DPP6P42658 865 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 EPHA5P54756 1037 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 USP4Q13107 963 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 QRICH1Q2TAL8 776 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 TMEM31Q5JXX7 168 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 CNNM4Q6P4Q7 775 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 DNASE1L2Q92874 299 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 FAXDC2Q96IV6 333 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 PRIMPOLQ96LW4 560 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 ZDHHC7Q9NXF8 308 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 CLIP2Q9UDT6 1046 aa6.16□□□□□ -1.42
CBWD3-215ENST00000619322 TMEM232C9JQI7 657 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 GPR32O75388 356 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 SMIM10L2AP0DMW4 78 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 SMIM10L2BP0DMW5 78 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 SOX11P35716 441 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 BECN1Q14457 450 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 HYIQ5T013 277 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 SRGAP1Q7Z6B7 1085 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 UROC1Q96N76 676 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 ESYT1Q9BSJ8 1104 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 LNPKQ9C0E8 428 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 NKX2-4Q9H2Z4 354 aa6.15□□□□□ -1.42
CBWD3-215ENST00000619322 AGO4Q9HCK5 861 aaKnown RBP6.15□□□□□ -1.42
CBWD3-215ENST00000619322 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms