RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 SSR1P43307 286 aaKnown RBP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 USP11P51784 963 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 XRCC4Q13426 336 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 LRIG3Q6UXM1 1119 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RTKN2Q8IZC4 609 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 C7orf25Q9BPX7 421 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ARMCX3Q9UH62 379 aaPredicted RBP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 PPP4CP60510 307 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MESDQ14696 234 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 FIGNQ5HY92 759 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 KRT25Q7Z3Z0 450 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CD302Q8IX05 232 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 C18orf8Q96DM3 657 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TMEM237Q96Q45 408 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 GNA11P29992 359 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MRPL12P52815 198 aaKnown RBP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 STRIP1Q5VSL9 837 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ZNF662Q6ZS27 426 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 PBKQ96KB5 322 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RAB17Q9H0T7 212 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 DDX4Q9NQI0 724 aaKnown RBP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CTNNAL1Q9UBT7 734 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MTRF1LQ9UGC7 380 aaKnown RBP14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ASIC3Q9UHC3 531 aa14.8□□□□□ -0.04
CNTNAP3B-215ENST00000619138 SUN1O94901 812 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 STAT3P40763 770 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RAD23BP54727 409 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 FBF1Q8TES7 1133 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 FAM118BQ9BPY3 351 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 IKZF4Q9H2S9 585 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 FAM114A2Q9NRY5 505 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 IRX1P78414 480 aaPredicted RBP14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 GRIPAP1Q4V328 841 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 GUF1Q8N442 669 aaKnown RBP14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MREGQ8N565 214 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 EMILIN3Q9NT22 766 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 BLOC1S4Q9NUP1 217 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ANAPC4Q9UJX5 808 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 PJA2O43164 708 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MGRN1O60291 552 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 NOL4O94818 638 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RHBDL3P58872 404 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CNOT10Q9H9A5 744 aaKnown RBP14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 NAGPAQ9UK23 515 aa14.79□□□□□ -0.04
CNTNAP3B-215ENST00000619138 POTEB3A0JP26 581 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 POTECB2RU33 542 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 SLC16A2P36021 539 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 GALCP54803 685 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ERMARDQ5T6L9 678 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 AGBL2Q5U5Z8 902 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 POTEBQ6S5H4 581 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ZFPM1Q8IX07 1006 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ARHGEF2Q92974 986 aaKnown RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 IFT74Q96LB3 600 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TSC22D3Q99576 134 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 KDM4CQ9H3R0 1056 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 H0YGN5 161 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 STXBP3O00186 592 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 XRCC5P13010 732 aaKnown RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ATP2A2P16615 1042 aaKnown RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CTCFP49711 727 aaPredicted RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 GNAQP50148 359 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 LRRC63Q05C16 580 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RBBP5Q15291 538 aaKnown RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 DLGAP5Q15398 846 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CCDC65Q8IXS2 484 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 SRRM1Q8IYB3 904 aaKnown RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TAB3Q8N5C8 712 aaPredicted RBP14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TPCN2Q8NHX9 752 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TMEM47Q9BQJ4 181 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ERVK-5Q9HDB9 667 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RASAL2Q9UJF2 1139 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 NFS1Q9Y697 457 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TNFRSF8P28908 595 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ECHS1P30084 290 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ZNF131P52739 623 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 SBK1Q52WX2 424 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ANKRD20A2Q5SQ80 823 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ANKRD20A1Q5TYW2 823 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ANKRD20A3Q5VUR7 823 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 LRRC55Q6ZSA7 311 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 ARMC9Q7Z3E5 817 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 RUBCNQ92622 972 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TAOK3Q9H2K8 898 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 PPP1R9AQ9ULJ8 1098 aa14.78□□□□□ -0.04
CNTNAP3B-215ENST00000619138 UCHL3P15374 230 aa14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 TNFAIP3P21580 790 aa14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 DACT2Q5SW24 774 aa14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 POP1Q99575 1024 aaKnown RBP14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 KLHL14Q9P2G3 628 aa14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 SERPINB13Q9UIV8 391 aa14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 CACNA1SQ13698 1873 aa14.77□□□□□ -0.04
CNTNAP3B-215ENST00000619138 MYH2Q9UKX2 1941 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms