RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PDGFRAP16234 1089 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 GJA5P36382 358 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 GRIK1P39086 918 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ATP5OP48047 213 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MCM2P49736 904 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 COG7P83436 770 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 KCNC4Q03721 635 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 AP1B1Q10567 949 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PSMD6Q15008 389 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PPA1Q15181 289 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CEP55Q53EZ4 464 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TM4SF20Q53R12 229 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TRAPPC3LQ5T215 181 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 LPCAT2Q7L5N7 544 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SH3BP5LQ7L8J4 393 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 KLHDC4Q8TBB5 520 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SHC3Q92529 594 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PPP1R14BQ96C90 147 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 GAL3ST1Q99999 423 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 APOL5Q9BWW9 433 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MRS2Q9HD23 443 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 USP40Q9NVE5 1235 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SEPT3Q9UH03 358 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ATPIF1Q9UII2 106 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PHTF1Q9UMS5 762 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 VPS9D1Q9Y2B5 631 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SPATA31A3Q5VYP0 1347 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MYPNQ86TC9 1320 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TARSL2A2RTX5 802 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 GOLGA6L4A6NEF3 574 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 WASLO00401 505 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC22A3O75751 556 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 DDX58O95786 925 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 OPN1MWP04001 364 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 OPN1MW2P0DN77 364 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 OPN1MW3P0DN78 364 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 HDCP19113 662 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 IL10P22301 178 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CES1P23141 567 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MCM3P25205 808 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 GPC3P51654 580 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CUL4BQ13620 913 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC15A2Q16348 729 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 BCL2A1Q16548 175 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 USH1GQ495M9 461 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF362Q5T0B9 420 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC6A19Q695T7 634 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 NEPROQ6NW34 567 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM173BQ6P4H8 233 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PLBD2Q8NHP8 589 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 GDAP1Q8TB36 358 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 RASGRP4Q8TDF6 673 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ZFAND2BQ8WV99 257 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 BSNDQ8WZ55 320 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 KIFC2Q96AC6 838 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 KIF1BPQ96EK5 621 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SNF8Q96H20 258 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 STMN4Q9H169 189 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 HPS5Q9UPZ3 1129 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PCDHB12Q9Y5F1 795 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TTC21BQ7Z4L5 1316 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 RPAP1Q9BWH6 1393 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 VSTM5A8MXK1 200 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 M0R2C6 588 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CA12O43570 354 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ABLIM3O94929 683 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 DNTTP04053 509 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF3P17036 446 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 JAK1P23458 1154 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HOXA6P31267 233 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 STAT1P42224 750 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ACADSBP45954 432 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SCTRP47872 440 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 OXCT1P55809 520 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 LRRFIP1Q32MZ4 808 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 MTERF2Q49AM1 385 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 AADACL4Q5VUY2 407 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 DRICH1Q6PGQ1 229 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 LRRC31Q6UY01 552 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RANBP10Q6VN20 620 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SYT10Q6XYQ8 523 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CCDC81Q6ZN84 652 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 NUP54Q7Z3B4 507 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 TMC7Q7Z402 723 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 NANOGNBQ7Z5D8 188 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 BBOF1Q8ND07 529 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CUL5Q93034 780 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HOOK2Q96ED9 719 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RBM41Q96IZ5 413 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ARL5BQ96KC2 179 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RMDN3Q96TC7 470 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 DNAJC7Q99615 494 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 GPATCH1Q9BRR8 931 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 PANK2Q9BZ23 570 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 EDEM3Q9BZQ6 932 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HELLSQ9NRZ9 838 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CHORDC1Q9UHD1 332 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ADGRE2Q9UHX3 823 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ZMYND8Q9ULU4 1186 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms