RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, human

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-220	ENST00000618606	BBC3	Q96PG8	261 aa	Predicted RBP	4.58	□□□□□ -1.68
TARDBP-220	ENST00000618606	INO80B	Q9C086	356 aa	Predicted RBP	4.58	□□□□□ -1.68
TARDBP-220	ENST00000618606	SNTG2	Q9NY99	539 aa		4.58	□□□□□ -1.68
TARDBP-220	ENST00000618606	SFMBT1	Q9UHJ3	866 aa		4.58	□□□□□ -1.68
TARDBP-220	ENST00000618606	MAGEL2	Q9UJ55	1249 aa		4.58	□□□□□ -1.68
TARDBP-220	ENST00000618606	ZAR1L	A6NP61	321 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	DVL2	O14641	736 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	PRL	P01236	227 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	RGS3	P49796	1198 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	DGKD	Q16760	1214 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	GAGE13	Q4V321	117 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	GAREM2	Q75VX8	874 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	GSPT2	Q8IYD1	628 aa	Known RBP	4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	ANKRD53	Q8N9V6	530 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	ZSWIM2	Q8NEG5	633 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	GCDH	Q92947	438 aa	Predicted RBP	4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	MAML3	Q96JK9	1138 aa		4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606	RBM8A	Q9Y5S9	174 aa	Known RBP	4.57	□□□□□ -1.68
TARDBP-220	ENST00000618606		A0A0A6YYK5	440 aa	Predicted RBP	4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	CD38	P28907	300 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	BPIFB4	P59827	614 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	SLC6A3	Q01959	620 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	ROM1	Q03395	351 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	TCIRG1	Q13488	830 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	CLEC14A	Q86T13	490 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	ADGRG3	Q86Y34	549 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	VRK3	Q8IV63	474 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	PLA2G15	Q8NCC3	412 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	OR5AN1	Q8NGI8	311 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	THAP3	Q8WTV1	239 aa	Predicted RBP	4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	C16orf92	Q96LL3	132 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	HAPLN2	Q9GZV7	340 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	ACSS2	Q9NR19	701 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	KCMF1	Q9P0J7	381 aa		4.56	□□□□□ -1.68
TARDBP-220	ENST00000618606	POLR2A	P24928	1970 aa	Known RBP	4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	UBE2QL1	A1L167	161 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606		E9PSI1	815 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	VSIG10L2	P0DP72	767 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	ITGB6	P18564	788 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	KIF11	P52732	1056 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	RABGGTB	P53611	331 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	ELAVL1	Q15717	326 aa	Known RBP	4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	HTR3D	Q70Z44	454 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	TCF25	Q9BQ70	676 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	GPR87	Q9BY21	358 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	NCOA5	Q9HCD5	579 aa	Known RBP	4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	TRPS1	Q9UHF7	1281 aa		4.55	□□□□□ -1.68
TARDBP-220	ENST00000618606	COL4A3	Q01955	1670 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	KLRG2	A4D1S0	409 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	GRID2IP	A4D2P6	1211 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	GOLGA8B	A8MQT2	603 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606		B4E1Z4	1266 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606		M0R2C6	588 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	PLD2	O14939	933 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	FAM20B	O75063	409 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	ERBB2	P04626	1255 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	CYP17A1	P05093	508 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	ZNF37A	P17032	561 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	RABL3	Q5HYI8	236 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	TTC38	Q5R3I4	469 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	LY6G5C	Q5SRR4	150 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	SLFN12L	Q6IEE8	588 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	BHLHA9	Q7RTU4	235 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	BMP8A	Q7Z5Y6	402 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	DDX53	Q86TM3	631 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	ZNF276	Q8N554	614 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	WDR92	Q96MX6	357 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	C8orf37	Q96NL8	207 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	MLST8	Q9BVC4	326 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	TOR3A	Q9H497	397 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	IL23A	Q9NPF7	189 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	FZD1	Q9UP38	647 aa		4.54	□□□□□ -1.68
TARDBP-220	ENST00000618606	UBA6	A0AVT1	1052 aa	Predicted RBP	4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	PPFIA4	O75335	1185 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	GLRX3	O76003	335 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	KRT37	O76014	449 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	JUN	P05412	331 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	ITGB1	P05556	798 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	SMAD3	P84022	425 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	PTPA	Q15257	358 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	C2orf27A	Q580R0	203 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	FKBP15	Q5T1M5	1219 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	SOGA3	Q5TF21	947 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	C1QL3	Q5VWW1	255 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	MFSD5	Q6N075	450 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	SYNE4	Q8N205	404 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	LILRB2	Q8N423	598 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	CHST14	Q8NCH0	376 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	DYDC2	Q96IM9	177 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	CLUHP3	Q96NS8	147 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	SRPK1	Q96SB4	655 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	MNT	Q99583	582 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	SAMD15	Q9P1V8	674 aa		4.53	□□□□□ -1.68
TARDBP-220	ENST00000618606	GRXCR1	A8MXD5	290 aa		4.52	□□□□□ -1.69
TARDBP-220	ENST00000618606	DAPK3	O43293	454 aa		4.52	□□□□□ -1.69
TARDBP-220	ENST00000618606	MFAP3L	O75121	409 aa		4.52	□□□□□ -1.69
TARDBP-220	ENST00000618606	TOX4	O94842	621 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms