RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MED24O75448 989 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 ALADP13716 330 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 DARSP14868 501 aaKnown RBP17.83■□□□□ 0.44
BRCA1-228ENST00000618469 EIF4BP23588 611 aaKnown RBP17.83■□□□□ 0.44
BRCA1-228ENST00000618469 PTGDRQ13258 359 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 HAUS3Q68CZ6 603 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 NPAS4Q8IUM7 802 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 C4orf32Q8N8J7 132 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 TMEM143Q96AN5 459 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 MTRQ99707 1265 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 ADAM2Q99965 735 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 RC3H2Q9HBD1 1191 aaKnown RBP17.83■□□□□ 0.44
BRCA1-228ENST00000618469 COL4A3BPQ9Y5P4 624 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 KIAA1671Q9BY89 1806 aa17.83■□□□□ 0.44
BRCA1-228ENST00000618469 A0A087WZ62 844 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 GAS2O43903 313 aaKnown RBP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 SPATA31C1P0DKV0 1188 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 FGFR4P22455 802 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 SARSP49591 514 aaKnown RBP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 FXR2P51116 673 aaKnown RBP eCLIP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 CLUL1Q15846 466 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 POTEGQ6S5H5 508 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 ZNF410Q86VK4 478 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 KSR1Q8IVT5 923 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 EXOC8Q8IYI6 725 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 PIGOQ8TEQ8 1089 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 PSPC1Q8WXF1 523 aaKnown RBP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 PHOX2BQ99453 314 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 FDXACB1Q9BRP7 624 aaPredicted RBP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 GCOM2Q9BZD3 368 aaPredicted RBP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 ATP6V0A4Q9HBG4 840 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 TUFT1Q9NNX1 390 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.82■□□□□ 0.44
BRCA1-228ENST00000618469 C1orf112Q9NSG2 853 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 LRFN2Q9ULH4 789 aa17.82■□□□□ 0.44
BRCA1-228ENST00000618469 A0A087WWV3 80 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 DCXO43602 365 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 USO1O60763 962 aaKnown RBP17.81■□□□□ 0.44
BRCA1-228ENST00000618469 CSDE1O75534 798 aaKnown RBP17.81■□□□□ 0.44
BRCA1-228ENST00000618469 CSPG5O95196 566 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 STAG3L1P0CL83 205 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 RARRES1P49788 294 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 CDC42EP1Q00587 391 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 TCEAL5Q5H9L2 206 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 CATSPER3Q86XQ3 398 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 FIBCD1Q8N539 461 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 TCP11Q8WWU5 503 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
BRCA1-228ENST00000618469 XPNPEP1Q9NQW7 623 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 RGS18Q9NS28 235 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 ANKEF1Q9NU02 776 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 FOXD4L1Q9NU39 408 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 C5orf42Q9H799 3197 aa17.81■□□□□ 0.44
BRCA1-228ENST00000618469 ATG2AQ2TAZ0 1938 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 LAD1O00515 517 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 DGAT1O75907 488 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 DGKIO75912 1065 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 PDCP20941 246 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 SFPQP23246 707 aaKnown RBP eCLIP17.8■□□□□ 0.44
BRCA1-228ENST00000618469 BTG3Q14201 252 aaPredicted RBP17.8■□□□□ 0.44
BRCA1-228ENST00000618469 DSC3Q14574 896 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 PAN2Q504Q3 1202 aaKnown RBP17.8■□□□□ 0.44
BRCA1-228ENST00000618469 EPC2Q52LR7 807 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 FAM43BQ6ZT52 329 aaPredicted RBP17.8■□□□□ 0.44
BRCA1-228ENST00000618469 HFE2Q6ZVN8 426 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 SLC24A5Q71RS6 500 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 MRPL38Q96DV4 380 aaKnown RBP17.8■□□□□ 0.44
BRCA1-228ENST00000618469 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 LRWD1Q9UFC0 647 aa17.8■□□□□ 0.44
BRCA1-228ENST00000618469 C9IYK1 514 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 ZSCAN20P17040 1043 aaPredicted RBP17.79■□□□□ 0.44
BRCA1-228ENST00000618469 RPA1P27694 616 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 CCT6AP40227 531 aaKnown RBP17.79■□□□□ 0.44
BRCA1-228ENST00000618469 PRPHP41219 470 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 GATMP50440 423 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 GPM6BQ13491 265 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 CRIPAKQ8N1N5 446 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 PRPF31Q8WWY3 499 aaKnown RBP17.79■□□□□ 0.44
BRCA1-228ENST00000618469 ZNF689Q96CS4 500 aaPredicted RBP17.79■□□□□ 0.44
BRCA1-228ENST00000618469 SAMD11Q96NU1 681 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 CLDND1Q9NY35 253 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 PCDHB7Q9Y5E2 793 aa17.79■□□□□ 0.44
BRCA1-228ENST00000618469 FNDC1Q4ZHG4 1894 aaPredicted RBP17.79■□□□□ 0.44
BRCA1-228ENST00000618469 PP2D1A8MPX8 630 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 SRGAP2CP0DJJ0 459 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 CTNNB1P35222 781 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 ZP2Q05996 745 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 DTHD1Q6ZMT9 781 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 CATSPER4Q7RTX7 472 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 BRAPQ7Z569 592 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 HSCBQ8IWL3 235 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 TMEM192Q8IY95 271 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 CMTR2Q8IYT2 770 aaKnown RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms