RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ARP10275 920 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 CLCN3P51790 818 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 GTF2A2P52657 109 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 EVX2Q03828 476 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 DRAP1Q14919 205 aaPredicted RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 SMAD1Q15797 465 aaKnown RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 DENND2CQ68D51 928 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 CYP2W1Q8TAV3 490 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 MAIP1Q8WWC4 291 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 EFCC1Q9HA90 598 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 CNOT8Q9UFF9 292 aaKnown RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 USP32Q8NFA0 1604 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 CTNNA1P35221 906 aaKnown RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 TCF7P36402 384 aaPredicted RBP10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 SGO2Q562F6 1265 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 TTC30AQ86WT1 665 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 SMC6Q96SB8 1091 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 SMYD2Q9NRG4 433 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 AGAP1Q9UPQ3 857 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
SMARCA1-205ENST00000617310 LGALS16A8MUM7 142 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 TNFAIP2Q03169 654 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 GLRA4Q5JXX5 417 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 CEP85LQ5SZL2 805 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 HHATQ5VTY9 493 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 KCTD6Q8NC69 237 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 AP1M1Q9BXS5 423 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 SIK2Q9H0K1 926 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 PPP1R9AQ9ULJ8 1098 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 POC1B-GALNT4F8VUJ3 575 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 M0QYV0 167 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 ICAM1P05362 532 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 ATF2P15336 505 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 PSMA2P25787 234 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 HERVK_113P62684 666 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 TUBB4BP68371 445 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 EMC2Q15006 297 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 EFCAB12Q6NXP0 572 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 TMEM35BQ8NCS4 154 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 AFG1LQ8WV93 481 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 CCSER1Q9C0I3 900 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 SAMD15Q9P1V8 674 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 TTC26A0AVF1 554 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 MSH4O15457 936 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 PDGFRBP09619 1106 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 PLTPP55058 493 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 ACTR2P61160 394 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 SREBF2Q12772 1141 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 KRT39Q6A163 491 aa10.9□□□□□ -0.66
SMARCA1-205ENST00000617310 MFAP3LO75121 409 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 SERPING1P05155 500 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 TSPY1Q01534 308 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 DUOXA2Q1HG44 320 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 RINT1Q6NUQ1 792 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 MCUQ8NE86 351 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 NLGN2Q8NFZ4 835 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 PIDD1Q9HB75 910 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 SEL1LQ9UBV2 794 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 ITSN1Q15811 1721 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 RPS6KA5O75582 802 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 ATP11AP98196 1134 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 GFPT1Q06210 699 aaPredicted RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 PDIA5Q14554 519 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 GPC2Q8N158 579 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 GANCQ8TET4 914 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 IL17RBQ9NRM6 502 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 HEY1Q9Y5J3 304 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 ARHGEF37A1IGU5 675 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 PDHXO00330 501 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 CNTN2Q02246 1040 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 DGKZQ13574 1117 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 PAN2Q504Q3 1202 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 NAALADL2Q58DX5 795 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 C6orf163Q5TEZ5 329 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 MYLK4Q86YV6 388 aaPredicted RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 ACAP3Q96P50 834 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 SLC12A6Q9UHW9 1150 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 PCDHA13Q9Y5I0 950 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 TFRCP02786 760 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 ATP1A2P50993 1020 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 SARNPP82979 210 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 KIZQ2M2Z5 673 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 CATSPER3Q86XQ3 398 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 RPUSD2Q8IZ73 545 aaKnown RBP10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 THEM5Q8N1Q8 247 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 GPD1LQ8N335 351 aa10.89□□□□□ -0.67
SMARCA1-205ENST00000617310 GABPB2Q8TAK5 448 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms