RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 OTUD6AQ7L8S5 288 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 GPRC5AQ8NFJ5 357 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 KIF18AQ8NI77 898 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 GLG1Q92896 1179 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 SUGCTQ9HAC7 445 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 KCND2Q9NZV8 630 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 CPA4Q9UI42 421 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 ZNFX1Q9P2E3 1918 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 ZNF263O14978 683 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 EIF3DO15371 548 aaKnown RBP eCLIP8.53□□□□□ -1.04
NEK3-207ENST00000617054 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 ADSSP30520 456 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 POLGP54098 1239 aaPredicted RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 ETF1P62495 437 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 TRIM14Q14142 442 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 BAP1Q92560 729 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 PPP1R16BQ96T49 567 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 SENP7Q9BQF6 1050 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 STRA6Q9BX79 667 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 KMT5AQ9NQR1 393 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 DDX41Q9UJV9 622 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 SCN4AP35499 1836 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 NFASCO94856 1347 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 TLR2O60603 784 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 URI1O94763 535 aaPredicted RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 AFPP02771 609 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 TXNP10599 105 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 CETPP11597 493 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 PSMC2P35998 433 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 STAT5BP51692 787 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 RAPGEF1Q13905 1077 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 ZC3H3Q8IXZ2 948 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 LRRC71Q8N4P6 559 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 TMEM161BQ8NDZ6 487 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 ZNF397Q8NF99 534 aaPredicted RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 MYRIPQ8NFW9 859 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 CCDC127Q96BQ5 260 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 NAA15Q9BXJ9 866 aaKnown RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 LACRTQ9GZZ8 138 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 POLR3FQ9H1D9 316 aaPredicted RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 KCND1Q9NSA2 647 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 ANKEF1Q9NU02 776 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 SEL1LQ9UBV2 794 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 PAXBP1Q9Y5B6 917 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 MAFBQ9Y5Q3 323 aaPredicted RBP8.53□□□□□ -1.04
NEK3-207ENST00000617054 DOCK3Q8IZD9 2030 aa8.53□□□□□ -1.04
NEK3-207ENST00000617054 DNAJC25-GNG10A0A024R161 153 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 GNA14O95837 355 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 PON1P27169 355 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 EIF4A3P38919 411 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 GTF2A2P52657 109 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 IRX5P78411 483 aaPredicted RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 GFPT1Q06210 699 aaPredicted RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 DMP1Q13316 513 aaPredicted RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 EXOC3L4Q17RC7 722 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 SEZ6Q53EL9 994 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 TDRD12Q587J7 1177 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 ZNF569Q5MCW4 686 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 PRAMEF19Q5SWL8 479 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 SPRYD7Q5W111 196 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 FRMD5Q7Z6J6 570 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 CBWD2Q8IUF1 395 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 PLEKHO2Q8TD55 490 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 CCDC51Q96ER9 411 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 BORCS6Q96GS4 357 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 NUP58Q9BVL2 599 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ZNHIT6Q9NWK9 470 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 TBX20Q9UMR3 447 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 FRMD4BQ9Y2L6 1034 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 FHOD1Q9Y613 1164 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 LOC285556D6RIA3 1793 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 TTLL13PA6NNM8 815 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 NOP56O00567 594 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 CSDE1O75534 798 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 STAM2O75886 525 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 OATP04181 439 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 CNGA1P29973 690 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ICAM3P32942 547 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 KCNJ6P48051 423 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 GCLMP48507 274 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ZNF157P51786 506 aaPredicted RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 MARSP56192 900 aaKnown RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 IGBP1P78318 339 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ARHGAP29Q52LW3 1261 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ARMCX2Q7L311 632 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ASAP3Q8TDY4 903 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 ZBTB45Q96K62 511 aaPredicted RBP8.52□□□□□ -1.05
NEK3-207ENST00000617054 CCDC42Q96M95 316 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 HSPBP1Q9NZL4 362 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 GCNT4Q9P109 453 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 PLAGL2Q9UPG8 496 aa8.52□□□□□ -1.05
NEK3-207ENST00000617054 LRRIQ4A6NIV6 560 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ENC1O14682 589 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ATG7O95352 703 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms