RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 AGAP1Q9UPQ3 857 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 SNX24Q9Y343 169 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 TBX3O15119 743 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 RIPK2O43353 540 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 MED24O75448 989 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 SUN1O94901 812 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 UBOX5O94941 541 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 GJB6O95452 261 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 ANP32DO95626 131 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 VIMP08670 466 aaKnown RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 CLTAP09496 248 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 RFX1P22670 979 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 PAX7P23759 505 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 BTDP43251 543 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 IFI35P80217 286 aaPredicted RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 ZNF543Q08ER8 600 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 GRIK3Q13003 919 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 MKRN3Q13064 507 aaKnown RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 ZNF568Q3ZCX4 644 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 TRMT10CQ7L0Y3 403 aaKnown RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 SFR1Q86XK3 245 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 ERMNQ8TAM6 284 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 VTI1AQ96AJ9 217 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 OSGEPQ9NPF4 335 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 IGSF9BQ9UPX0 1349 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 RASGRF2O14827 1237 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 EIF3DO15371 548 aaKnown RBP eCLIP16.82■□□□□ 0.28
GPN1-212ENST00000616939 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 ATP5DP30049 168 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 DCAF17Q5H9S7 520 aaPredicted RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 DNAAF5Q86Y56 855 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 ART4Q93070 314 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 TBC1D31Q96DN5 1066 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
GPN1-212ENST00000616939 TAOK3Q9H2K8 898 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 ECT2Q9H8V3 914 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
GPN1-212ENST00000616939 UBE4BO95155 1302 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
GPN1-212ENST00000616939 GAP43P17677 238 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 RPL21P46778 160 aaKnown RBP16.81■□□□□ 0.28
GPN1-212ENST00000616939 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
GPN1-212ENST00000616939 COPS2P61201 443 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 ICA1Q05084 483 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 CCDC15Q0P6D6 951 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 KIF22Q14807 665 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 BICDL1Q6ZP65 573 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 ZNF804AQ7Z570 1209 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
GPN1-212ENST00000616939 UBL4BQ8N7F7 174 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 CEP120Q8N960 986 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 C12orf50Q8NA57 414 aaPredicted RBP16.81■□□□□ 0.28
GPN1-212ENST00000616939 RPS6KC1Q96S38 1066 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
GPN1-212ENST00000616939 TLDC2A0PJX2 215 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 NEBLO76041 1014 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 RPA1P27694 616 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 FAM133BQ5BKY9 247 aaKnown RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 LRCH2Q5VUJ6 765 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 BZW1Q7L1Q6 419 aaKnown RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 PRELID2Q8N945 189 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 ALG3Q92685 438 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 GLG1Q92896 1179 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 SERPINB12Q96P63 405 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 REEP2Q9BRK0 252 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 SEMA4AQ9H3S1 761 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 OLFML3Q9NRN5 406 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 ARL2BPQ9Y2Y0 163 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 MTA2O94776 668 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 RPSAP08865 295 aaKnown RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 PPARDQ03181 441 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 PRPF4BQ13523 1007 aaKnown RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 GRIK5Q16478 980 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 GPATCH4Q5T3I0 446 aaKnown RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 ASRGL1Q7L266 308 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 GLYCTKQ8IVS8 523 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 ADGRF4Q8IZF3 695 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 EPS8L3Q8TE67 593 aaKnown RBP16.8■□□□□ 0.28
GPN1-212ENST00000616939 ARHGEF26Q96DR7 871 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 ZSWIM1Q9BR11 485 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 SLC5A4Q9NY91 659 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 PRKAG3Q9UGI9 489 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
GPN1-212ENST00000616939 GAKO14976 1311 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 POTEFA5A3E0 1075 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 IGF2BP3O00425 579 aaKnown RBP eCLIP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms