RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 TNFRSF8P28908 595 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 P3H1Q32P28 736 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 MORC4Q8TE76 937 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 HAUS1Q96CS2 278 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 PREBQ9HCU5 417 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 GPCPD1Q9NPB8 672 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 LMCD1Q9NZU5 365 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 MYH6P13533 1939 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 PASKQ96RG2 1323 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 CIB2O75838 187 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 PPP1R2P41236 205 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 MCL1Q07820 350 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 TAF1BQ53T94 588 aaPredicted RBP15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 HOMEZQ8IX15 550 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 GALNT15Q8N3T1 639 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 FAM13CQ8NE31 585 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 IQCDQ96DY2 449 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 RILPQ96NA2 401 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 ZNF317Q96PQ6 595 aaPredicted RBP15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 NMRK1Q9NWW6 199 aa15.04■□□□□ -0
TNFRSF11A-205ENST00000616710 EXOC1LA0A1B0GW35 172 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 KLRF2D3W0D1 207 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 H0YGN5 161 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 FAM200BP0CF97 657 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 PABPC4Q13310 644 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 RIPK1Q13546 671 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 USP17L2Q6R6M4 530 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 EXOC3L1Q86VI1 746 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 COA7Q96BR5 231 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 IQCGQ9H095 443 aaKnown RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 MMADHCQ9H3L0 296 aaPredicted RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 HOMER2Q9NSB8 354 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 CLIC5Q9NZA1 410 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 TFCP2L1Q9NZI6 479 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 NFS1Q9Y697 457 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 FRMPD2Q68DX3 1309 aaPredicted RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 ATP6V1B1P15313 513 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 SERPINB6P35237 376 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 PFKFB3Q16875 520 aaPredicted RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 SGO2Q562F6 1265 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 MFSD4BQ5TF39 518 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 MTDHQ86UE4 582 aaKnown RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 LCA5Q86VQ0 697 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 ERVK-5Q9HDB9 667 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 KBTBD4Q9NVX7 518 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 NIP7Q9Y221 180 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 GOLGA8SH3BPF8 625 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 GOLGA8MH3BSY2 632 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 TROVE2P10155 538 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 RPL21P46778 160 aaKnown RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 KDSRQ06136 332 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 TROAPQ12815 778 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 CTTNQ14247 550 aaKnown RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 KAZNQ674X7 775 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 MAP7D3Q8IWC1 876 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 MAML1Q92585 1016 aa15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 DNAJC1Q96KC8 554 aaKnown RBP15.03■□□□□ -0
TNFRSF11A-205ENST00000616710 C5orf60A6NFR6 353 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 TBCAO75347 108 aaKnown RBP15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 KITP10721 976 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 UCHL3P15374 230 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 ATP6V1C1P21283 382 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 VHLP40337 213 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 GRAMD1BQ3KR37 738 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 SLC44A5Q8NCS7 719 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 ATG4AQ8WYN0 398 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 BTBD6Q96KE9 485 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 RUNDC3BQ96NL0 473 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 CRNKL1Q9BZJ0 848 aaKnown RBP15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 IKBKGQ9Y6K9 419 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 TDP2O95551 362 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 MARK3P27448 753 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 GNA11P29992 359 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 MTMR2Q13614 643 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 KPNB1Q14974 876 aaKnown RBP15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 PPP2R5BQ15173 497 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 RMI1Q9H9A7 625 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 CYP39A1Q9NYL5 469 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 LNPEPQ9UIQ6 1025 aa15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 FAF1Q9UNN5 650 aaPredicted RBP15.02■□□□□ -0
TNFRSF11A-205ENST00000616710 G3V3G9 751 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZNF189O75820 626 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 UNC5CO95185 931 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 EPHB1P54762 984 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CTSWP56202 376 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CDK17Q00537 523 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 MST1RQ04912 1400 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 LRRC63Q05C16 580 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DCAF8Q5TAQ9 597 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 UNC13DQ70J99 1090 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CENPKQ9BS16 269 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CDC42EP4Q9H3Q1 356 aaKnown RBP15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PARP2Q9UGN5 583 aa15.02□□□□□ -0.01
TNFRSF11A-205ENST00000616710 USP17L8P0C7I0 530 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 AUHQ13825 339 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms