RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 IGKV6D-21A0A0A0MT36 114 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 MCM5P33992 734 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 TBC1D8BQ0IIM8 1120 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZNF484Q5JVG2 852 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 RSAD2Q8WXG1 361 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 TBC1D17Q9HA65 648 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 IGSF9Q9P2J2 1179 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 CA14Q9ULX7 337 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 IRAK3Q9Y616 596 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 COL1A2P08123 1366 aa19.88■□□□□ 0.77
TRAPPC3-209ENST00000616395 CEP250Q9BV73 2442 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 BACH1O14867 736 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 C22orf31O95567 290 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 CCNE2O96020 404 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 DCNP07585 359 aaKnown RBP19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 CTSAP10619 480 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZSCAN20P17040 1043 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 RXRAP19793 462 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZNF654Q8IZM8 581 aa19.87■□□□□ 0.77
TRAPPC3-209ENST00000616395 SPDYE4A6NLX3 237 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 CPA1P15085 419 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 RPS6KB1P23443 525 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 POLGP54098 1239 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 GIT2Q14161 759 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 LETM2Q2VYF4 491 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 CCDC60Q8IWA6 550 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 METTL13Q8N6R0 699 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 SUMF1Q8NBK3 374 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 SPRYD3Q8NCJ5 442 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 INTS4Q96HW7 963 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 AGO4Q9HCK5 861 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 DLGAP2Q9P1A6 1054 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 OTOGLQ3ZCN5 2332 aa19.86■□□□□ 0.77
TRAPPC3-209ENST00000616395 N4BP1O75113 896 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 FAM160B1Q5W0V3 765 aa19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 PDXDC2PQ6P474 469 aa19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 ABHD15Q6UXT9 468 aa19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 NFXL1Q6ZNB6 911 aa19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 DDX53Q86TM3 631 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZNF598Q86UK7 904 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 PPFIBP1Q86W92 1011 aa19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 C1orf210Q8IVY1 113 aa19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 CTCFLQ8NI51 663 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 BCL7CQ8WUZ0 217 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 MRPL9Q9BYD2 267 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-209ENST00000616395 DDX39AO00148 427 aaKnown RBP19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZC3H11AO75152 810 aaKnown RBP eCLIP19.84■□□□□ 0.774e-14■□□□□ 9.5
TRAPPC3-209ENST00000616395 PLEKHA8P1O95397 391 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 PDIA4P13667 645 aaKnown RBP19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 ATP4AP20648 1035 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 SMARCA1P28370 1054 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 KIF5BP33176 963 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 NUCB2P80303 420 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 CMTR1Q8N1G2 835 aaKnown RBP19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 SRBD1Q8N5C6 995 aaKnown RBP19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 TMX3Q96JJ7 454 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 MAP3K14Q99558 947 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZNF302Q9NR11 478 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 SIT1Q9Y3P8 196 aa19.84■□□□□ 0.77
TRAPPC3-209ENST00000616395 A0A0U1RQF3 1178 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 hCG_1642624A0A1W2PR95 340 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 CCDC69A6NI79 296 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 CLCN3P51790 818 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 AK2P54819 239 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 NLRP11P59045 1033 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 DHX32Q7L7V1 743 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 CKAP2LQ8IYA6 745 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 SLC44A3Q8N4M1 653 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 IGSF21Q96ID5 467 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 TMEM87BQ96K49 555 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 ADAMTS10Q9H324 1103 aa19.83■□□□□ 0.77
TRAPPC3-209ENST00000616395 TPRP12270 2363 aaKnown RBP19.83■□□□□ 0.76
TRAPPC3-209ENST00000616395 POTEMA6NI47 508 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 DDAH1O94760 285 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 CD2BP2O95400 341 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 SRFP11831 508 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 EIF4BP23588 611 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 GBP2P32456 591 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 CLCN4P51793 760 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 ATXN1P54253 815 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 NONOQ15233 471 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 PTPN14Q15678 1187 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 ST3GAL2Q16842 350 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 CEP55Q53EZ4 464 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 PHLDB3Q6NSJ2 640 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 SWSAP1Q6NVH7 229 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 POTEGQ6S5H5 508 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 C15orf39Q6ZRI6 1047 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 TRMT1LQ7Z2T5 733 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 GPR152Q8TDT2 470 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 ZNF668Q96K58 619 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 LZTS2Q9BRK4 669 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 ACACBO00763 2458 aa19.82■□□□□ 0.76
TRAPPC3-209ENST00000616395 KINO60870 393 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 KLRC2P26717 231 aa19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 MICU3Q86XE3 530 aa19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 MAML2Q8IZL2 1156 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 PGBD1Q96JS3 809 aa19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 KLHL5Q96PQ7 755 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 457.8 ms