RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 FAM49AQ9H0Q0 323 aaPredicted RBP11.96□□□□□ -0.49
COL4A1-205ENST00000615732 NSUN3Q9H649 340 aaKnown RBP11.96□□□□□ -0.49
COL4A1-205ENST00000615732 DISC1Q9NRI5 854 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.49
COL4A1-205ENST00000615732 MAN1B1Q9UKM7 699 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 ADGRA3Q8IWK6 1321 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 DCXO43602 365 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 SLC37A4O43826 429 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 LINC00271P0C7V0 271 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 IBSPP21815 317 aaPredicted RBP11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TECP42680 631 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TXKP42681 527 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 KARSQ15046 597 aaKnown RBP11.95□□□□□ -0.5
COL4A1-205ENST00000615732 MARCH8Q5T0T0 291 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TAF2Q6P1X5 1199 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 RPAINQ86UA6 219 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 DHX40Q8IX18 779 aaKnown RBP11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TRAPPC12Q8WVT3 735 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 LINC01599Q8WXQ3 324 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 SEPT1Q8WYJ6 367 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 APBB2Q92870 758 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 CALML4Q96GE6 196 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 CDK5RAP3Q96JB5 506 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TRIM5Q9C035 493 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 MAGEF1Q9HAY2 307 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 ERAP1Q9NZ08 941 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 UBIAD1Q9Y5Z9 338 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 CDY2AQ9Y6F7 541 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 TRIOO75962 3097 aa11.95□□□□□ -0.5
COL4A1-205ENST00000615732 POTEB3A0JP26 581 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 LTBRP36941 435 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL4A1-205ENST00000615732 USP11P51784 963 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 CLUL1Q15846 466 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 E2F4Q16254 413 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 HS1BP3Q53T59 392 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 POTEBQ6S5H4 581 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 MOXD1Q6UVY6 613 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
COL4A1-205ENST00000615732 CYP2W1Q8TAV3 490 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 CCDC47Q96A33 483 aaKnown RBP11.94□□□□□ -0.5
COL4A1-205ENST00000615732 CDHR1Q96JP9 859 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 PCYT2Q99447 389 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 CUEDC2Q9H467 287 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 AGO3Q9H9G7 860 aaKnown RBP11.94□□□□□ -0.5
COL4A1-205ENST00000615732 RC3H2Q9HBD1 1191 aaKnown RBP11.94□□□□□ -0.5
COL4A1-205ENST00000615732 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
COL4A1-205ENST00000615732 JADE2Q9NQC1 790 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 RMND1Q9NWS8 449 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 CLDND1Q9NY35 253 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
COL4A1-205ENST00000615732 MBLAC1A4D2B0 266 aaPredicted RBP11.93□□□□□ -0.5
COL4A1-205ENST00000615732 PP2D1A8MPX8 630 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 C5orf67F2Z3F1 127 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
COL4A1-205ENST00000615732 IKBKBO14920 756 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 GRM6O15303 877 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 CDC25AP30304 524 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 CD52P31358 61 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 ZNF76P36508 570 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 ZNF75DP51815 510 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 MRPS6P82932 125 aaKnown RBP11.93□□□□□ -0.5
COL4A1-205ENST00000615732 MYL5Q02045 173 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 NHLH1Q02575 133 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 MORC3Q14149 939 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 FBXO47Q5MNV8 452 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 TSHZ1Q6ZSZ6 1077 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 RSPH3Q86UC2 560 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 ADHFE1Q8IWW8 467 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 GSDMAQ96QA5 445 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 MTMR9Q96QG7 549 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 SMARCAD1Q9H4L7 1026 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 LRWD1Q9UFC0 647 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 PRKAG3Q9UGI9 489 aa11.93□□□□□ -0.5
COL4A1-205ENST00000615732 TPM3P06753 285 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 INSRRP14616 1297 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 PLCG1P19174 1290 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 GTF2F1P35269 517 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 IRS1P35568 1242 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 SREBF1P36956 1147 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 SARSP49591 514 aaKnown RBP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 GATMP50440 423 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 DLX2Q07687 328 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 HYAL1Q12794 435 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 DPYDQ12882 1025 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 ITGB3BPQ13352 177 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms