RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 C2CD6Q53TS8 623 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 ODR4Q5SWX8 454 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 ATG4AQ8WYN0 398 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 HAUS1Q96CS2 278 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 PABPC3Q9H361 631 aaKnown RBP12.68□□□□□ -0.38
CDH5-208ENST00000614547 RASA4BC9J798 803 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 RASA4O43374 803 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ATF2P15336 505 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 YY1P25490 414 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PON1P27169 355 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ATP5DP30049 168 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 GCLMP48507 274 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 CASP5P51878 434 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 MYL7Q01449 175 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 KCNA1Q09470 495 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 DNAJC3Q13217 504 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 KNOP1Q1ED39 458 aaKnown RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 ZC3H18Q86VM9 953 aaKnown RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 ZNF34Q8IZ26 560 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 WDR66Q8TBY9 1149 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 SCFD1Q8WVM8 642 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 CYTH2Q99418 400 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ZCWPW1Q9H0M4 648 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDH5-208ENST00000614547 ALG6Q9Y672 507 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 SPATA31A1Q5TZJ5 1347 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 CREB1P16220 341 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 CA4P22748 312 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PSEN1P49768 467 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 RASIP1Q5U651 963 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 C4orf33Q8N1A6 199 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PPFIBP2Q8ND30 876 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PWWP2AQ96N64 755 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 RAB3IPQ96QF0 476 aaPredicted RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 EDEM3Q9BZQ6 932 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ANKRD2Q9GZV1 360 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 HAO1Q9UJM8 370 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ANAPC5Q9UJX4 755 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ERVV-1B6SEH8 477 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 GOLGA8SH3BPF8 625 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 GOLGA8MH3BSY2 632 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 CLDN3O15551 220 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ATF7P17544 494 aaPredicted RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 PSMC6P62333 389 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 GTF2IP78347 998 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 ECM1Q16610 540 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
CDH5-208ENST00000614547 TPTE2Q6XPS3 522 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 RABGAP1Q9Y3P9 1069 aa12.67□□□□□ -0.38
CDH5-208ENST00000614547 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
CDH5-208ENST00000614547 TXNDC9O14530 226 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 AKAP3O75969 853 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 NOL4O94818 638 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 GAS8O95995 478 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 MARCKSL1P49006 195 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 SLC30A5Q8TAD4 765 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 RFFLQ8WZ73 363 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 REEP2Q9BRK0 252 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 KDM4CQ9H3R0 1056 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 METTL5Q9NRN9 209 aaKnown RBP12.66□□□□□ -0.38
CDH5-208ENST00000614547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH5-208ENST00000614547 A0A0G2JND7 137 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 CFAP73A6NFT4 308 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 DDX3XO00571 662 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH5-208ENST00000614547 BCRP11274 1271 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 RASA1P20936 1047 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 COPS2P61201 443 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 CD302Q8IX05 232 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 ARHGEF26Q96DR7 871 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
CDH5-208ENST00000614547 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 IRAK4Q9NWZ3 460 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 GOLGA8RI6L899 631 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 KRT16P08779 473 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 PSMC2P35998 433 aaKnown RBP12.66□□□□□ -0.38
CDH5-208ENST00000614547 CTCFP49711 727 aaPredicted RBP12.66□□□□□ -0.38
CDH5-208ENST00000614547 CACNB3P54284 484 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 IL9RQ01113 521 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 EPC2Q52LR7 807 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 C10orf76Q5T2E6 689 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 ERMARDQ5T6L9 678 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 CCT6BQ92526 530 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 KRT35Q92764 455 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms