RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HOXD10P28358 340 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 ACOT2P49753 483 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.54
FAM3A-221ENST00000612856 TUBB2AQ13885 445 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 CCDC25Q86WR0 208 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 FBXL16Q8N461 479 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 COPS5Q92905 334 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 ELMO3Q96BJ8 720 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 TUBB2BQ9BVA1 445 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 HAUS2Q9NVX0 235 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 ANAPC4Q9UJX5 808 aa11.71□□□□□ -0.54
FAM3A-221ENST00000612856 A0A087X0B3 334 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■□□□ 11.7
FAM3A-221ENST00000612856 VPS41P49754 854 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 GTF2A2P52657 109 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 APBA1Q02410 837 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
FAM3A-221ENST00000612856 SHISA4Q96DD7 197 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 SMARCAL1Q9NZC9 954 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 PPP1R9AQ9ULJ8 1098 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 ABCA3Q99758 1704 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 MYH2Q9UKX2 1941 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 CLDN3O15551 220 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 GSTA5Q7RTV2 222 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 FAM83AQ86UY5 434 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 MIEF2Q96C03 454 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 SELENOSQ9BQE4 189 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
FAM3A-221ENST00000612856 COL4A1P02462 1669 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 PIK3CAP42336 1068 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 CLCN3P51790 818 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
FAM3A-221ENST00000612856 BEX3Q00994 111 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 ASIC2Q16515 512 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 PAN2Q504Q3 1202 aaKnown RBP11.7□□□□□ -0.54
FAM3A-221ENST00000612856 TMED8Q6PL24 325 aaPredicted RBP11.7□□□□□ -0.54
FAM3A-221ENST00000612856 KLHL7Q8IXQ5 586 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 UBLCP1Q8WVY7 318 aaPredicted RBP11.7□□□□□ -0.54
FAM3A-221ENST00000612856 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
FAM3A-221ENST00000612856 GOLGA8KD6RF30 607 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 TACC1O75410 805 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 TNNC2P02585 160 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 SLC8A3P57103 927 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 MAPK6Q16659 721 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 ZNF568Q3ZCX4 644 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 NAA35Q5VZE5 725 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 BSPRYQ5W0U4 402 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 CCDC170Q8IYT3 715 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 ARL8AQ96BM9 186 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 CHP1Q99653 195 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 SPEF2Q9C093 1822 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 GOLGA6L10A0A0M3HER8 536 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 PGK1P00558 417 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 ZNF286BP0CG31 522 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 FXR1P51114 621 aaKnown RBP eCLIP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 EXOC3L4Q17RC7 722 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 TREML2Q5T2D2 321 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 AFG1LQ8WV93 481 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 C1orf112Q9NSG2 853 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 SYF2O95926 243 aaKnown RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 KRT83P78385 493 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 GUCY2DQ02846 1103 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 RBBP5Q15291 538 aaKnown RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 POLR3FQ9H1D9 316 aaPredicted RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 PIK3R2O00459 728 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 YWHABP31946 246 aaKnown RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 PRCPP42785 496 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 TFDP1Q14186 410 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 P2RX5Q93086 422 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 CCDC97Q96F63 343 aaPredicted RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 TBC1D22BQ9NU19 505 aa11.69□□□□□ -0.54
FAM3A-221ENST00000612856 PIN4Q9Y237 131 aaKnown RBP11.69□□□□□ -0.54
FAM3A-221ENST00000612856 ATRNO75882 1429 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 STAT1P42224 750 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 FKBP3Q00688 224 aaKnown RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 KRT76Q01546 638 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 GLRA4Q5JXX5 417 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 TBC1D1Q86TI0 1168 aaPredicted RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 BPIFA3Q9BQP9 254 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 NAA15Q9BXJ9 866 aaKnown RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 IDI2Q9BXS1 227 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 RNF208Q9H0X6 261 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 PNMA2Q9UL42 364 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 G3BP2Q9UN86 482 aaKnown RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 COMMD10Q9Y6G5 202 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms