RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 POLGP54098 1239 aaPredicted RBP19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 SETQ01105 290 aaPredicted RBP19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 ZNF598Q86UK7 904 aaKnown RBP19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 SIX5Q8N196 739 aa19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 DTWD2Q8NBA8 298 aa19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 DUSP12Q9UNI6 340 aa19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 PCDHA10Q9Y5I2 948 aa19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 IRAK3Q9Y616 596 aa19.47■□□□□ 0.71
CSNK1E-215ENST00000612795 IGLV3-22A0A075B6J6 115 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 DARSP14868 501 aaKnown RBP19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 NPR3P17342 541 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 CLK2P49760 499 aaKnown RBP19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 GPC3P51654 580 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 JAKMIP3Q5VZ66 844 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 PPFIBP1Q86W92 1011 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 TMEM173Q86WV6 379 aaPredicted RBP19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 SLC22A17Q8WUG5 538 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 NLRP7Q8WX94 980 aa19.46■□□□□ 0.71
CSNK1E-215ENST00000612795 STK25O00506 426 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 GPR149Q86SP6 731 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 DDX53Q86TM3 631 aaKnown RBP19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 SGMS1Q86VZ5 419 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 LINC01465Q8N7H1 131 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 EXOC6Q8TAG9 804 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 RSPH1Q8WYR4 309 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 IGSF21Q96ID5 467 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 BARHL2Q9NY43 387 aa19.45■□□□□ 0.7
CSNK1E-215ENST00000612795 FANCMQ8IYD8 2048 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 SLC27A2O14975 620 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 OATP04181 439 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 RNASELQ05823 741 aaKnown RBP19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 RTN1Q16799 776 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 APOA5Q6Q788 366 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 FEZF2Q8TBJ5 459 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 KCNK12Q9HB15 430 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 INPP5FQ9Y2H2 1132 aa19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
CSNK1E-215ENST00000612795 EP300Q09472 2414 aaPredicted RBP19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 WDR64B1ANS9 1081 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 LMNAP02545 664 aaKnown RBP19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 CYP3A4P08684 503 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 PRKCEQ02156 737 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 TBC1D8BQ0IIM8 1120 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 PTPN14Q15678 1187 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 TWF2Q6IBS0 349 aaKnown RBP19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 GLB1LQ6UWU2 654 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 EMILIN2Q9BXX0 1053 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 GBP3Q9H0R5 595 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 NRBP2Q9NSY0 501 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 TBC1D13Q9NVG8 400 aa19.43■□□□□ 0.7
CSNK1E-215ENST00000612795 DOCK8Q8NF50 2099 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 ZBTB43O43298 467 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 CSDE1O75534 798 aaKnown RBP19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 SFPQP23246 707 aaKnown RBP eCLIP19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 KLRC2P26717 231 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 PHKA2P46019 1235 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 LETM2Q2VYF4 491 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 LONRF3Q496Y0 759 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 PRR16Q569H4 304 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 DGLUCYQ7Z3D6 616 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 BCL7CQ8WUZ0 217 aaPredicted RBP19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 LPPQ93052 612 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 HINFPQ9BQA5 517 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 GCOM2Q9BZD3 368 aaPredicted RBP19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 SEMA4AQ9H3S1 761 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 NRDE2Q9H7Z3 1164 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 CHST12Q9NRB3 414 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 IGSF9Q9P2J2 1179 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 MIA3Q5JRA6 1907 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 ZNF292O60281 2723 aa19.42■□□□□ 0.7
CSNK1E-215ENST00000612795 NARSO43776 548 aaKnown RBP19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 SSBP05455 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 GALTP07902 379 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 CFHP08603 1231 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 SKIP12755 728 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 NOMO2Q5JPE7 1267 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 CREB3L3Q68CJ9 461 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 C15orf39Q6ZRI6 1047 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 CRYGNQ8WXF5 182 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 RMDN1Q96DB5 314 aa19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 PIN4Q9Y237 131 aaKnown RBP19.41■□□□□ 0.7
CSNK1E-215ENST00000612795 MED19A0JLT2 244 aaPredicted RBP19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 GOLGA8AA7E2F4 631 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 GOLGA8BA8MQT2 603 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 ZNF862O60290 1169 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 GBP2P32456 591 aaPredicted RBP19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 CLCN4P51793 760 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 FUT2Q10981 343 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 NONOQ15233 471 aaKnown RBP eCLIP19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 KIAA2013Q8IYS2 634 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 REXO1Q8N1G1 1221 aaKnown RBP19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 KLHL5Q96PQ7 755 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 LSG1Q9H089 658 aaKnown RBP19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 DISC1Q9NRI5 854 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 DNAJB4Q9UDY4 337 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 STK39Q9UEW8 545 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 R4GN57 208 aa19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 MTCL1Q9Y4B5 1905 aaKnown RBP19.4■□□□□ 0.7
CSNK1E-215ENST00000612795 TDRD15B5MCY1 1934 aaKnown RBP19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms