RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PEX10O60683 326 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 CCNE2O96020 404 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 CALCAP01258 141 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 H2AFZP0C0S5 128 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 SOX5P35711 763 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 STAT1P42224 750 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 PEX3P56589 373 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 KCTD16Q68DU8 428 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 H2AFVQ71UI9 128 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 NENFQ9UMX5 172 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 NR2E1Q9Y466 385 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 STK24Q9Y6E0 443 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 ANKRD65E5RJM6 399 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 TBC1D12O60347 775 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 PPP1R37O75864 691 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 SETQ01105 290 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 PDE4CQ08493 712 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 BFSP1Q12934 665 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 NBPF12Q5TAG4 269 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 SH2D3CQ8N5H7 860 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 USP38Q8NB14 1042 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 ZKSCAN4Q969J2 545 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 SAAL1Q96ER3 474 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 POP1Q99575 1024 aaKnown RBP15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 MED4Q9NPJ6 270 aa15.32■□□□□ 0.04
PCDHGA3-202ENST00000612467 KRT14P02533 472 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 VCAM1P19320 739 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 USP8P40818 1118 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 ITIH3Q06033 890 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 AADACL2Q6P093 401 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 FAM83AQ86UY5 434 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 TAF4BQ92750 862 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 ATG4CQ96DT6 458 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 ZBED3Q96IU2 234 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 ACBD3Q9H3P7 528 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 PPP1R9AQ9ULJ8 1098 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 SYNPO2Q9UMS6 1093 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 PPP1R12BO60237 982 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 BUB1BO60566 1050 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 GUCY2CP25092 1073 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 YWHABP31946 246 aaKnown RBP15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 C1orf220Q5T0J3 134 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 CPNE8Q86YQ8 564 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 LMO3Q8TAP4 145 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 AFAP1L1Q8TED9 768 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 STRA6Q9BX79 667 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 THAP2Q9H0W7 228 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 RPAP3Q9H6T3 665 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 LCMT1Q9UIC8 334 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
PCDHGA3-202ENST00000612467 P4HBP07237 508 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ZBTB48P10074 688 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ZNF211Q13398 564 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 PGM5Q15124 567 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 FAM102BQ5T8I3 360 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 TAF3Q5VWG9 929 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 CIAPIN1Q6FI81 312 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 SLC30A5Q8TAD4 765 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 SLC35G2Q8TBE7 412 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 CCDC43Q96MW1 224 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ZIM3Q96PE6 472 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 RIT2Q99578 217 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 APEX2Q9UBZ4 518 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 NOC2LQ9Y3T9 749 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 GJA3Q9Y6H8 435 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ATMINO43313 823 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ADRB2P07550 413 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 TTMPQ5BVD1 217 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 STK33Q9BYT3 514 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 NEUROG2Q9H2A3 272 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 SLC38A10Q9HBR0 1119 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 TOPORSQ9NS56 1045 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 COG5Q9UP83 839 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 UBIAD1Q9Y5Z9 338 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 FERP16591 822 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 ACTN2P35609 894 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 EPHB4P54760 987 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 LLGL1Q15334 1064 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 DLK2Q6UY11 383 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 HAUS6Q7Z4H7 955 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
PCDHGA3-202ENST00000612467 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms