RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PPP2R5AQ15172 486 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 TTI2Q6NXR4 508 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 C7orf31Q8N865 590 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 SLC17A8Q8NDX2 589 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 KLHDC9Q8NEP7 349 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 SPIRE2Q8WWL2 714 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 PSPC1Q8WXF1 523 aaKnown RBP19.33■□□□□ 0.68
SREK1-216ENST00000612404 TSG101Q99816 390 aa19.33■□□□□ 0.68
SREK1-216ENST00000612404 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.33■□□□□ 0.681e-5■■■□□ 18
SREK1-216ENST00000612404 HOXD13P35453 343 aa19.32■□□□□ 0.68
SREK1-216ENST00000612404 LBX1P52954 281 aa19.32■□□□□ 0.68
SREK1-216ENST00000612404 ALCAMQ13740 583 aa19.32■□□□□ 0.68
SREK1-216ENST00000612404 KNOP1Q1ED39 458 aaKnown RBP19.32■□□□□ 0.68
SREK1-216ENST00000612404 MARCH8Q5T0T0 291 aa19.32■□□□□ 0.68
SREK1-216ENST00000612404 PCSK9Q8NBP7 692 aaKnown RBP19.32■□□□□ 0.68
SREK1-216ENST00000612404 SAMSN1Q9NSI8 373 aaKnown RBP19.32■□□□□ 0.68
SREK1-216ENST00000612404 TMOD1P28289 359 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 CST5P28325 142 aaPredicted RBP19.31■□□□□ 0.68
SREK1-216ENST00000612404 NAMPTP43490 491 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 BMT2Q1RMZ1 405 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 LHX8Q68G74 356 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 RHPN2Q8IUC4 686 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 CSGALNACT2Q8N6G5 542 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 TMEM161BQ8NDZ6 487 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 DEPTORQ8TB45 409 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 NTPCRQ9BSD7 190 aaKnown RBP19.31■□□□□ 0.68
SREK1-216ENST00000612404 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 KCTD10Q9H3F6 313 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 KCNG1Q9UIX4 513 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 DENND3A2RUS2 1198 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 GJB1P08034 283 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 LRRC63Q05C16 580 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 LAMTOR4Q0VGL1 99 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 MXD4Q14582 209 aaPredicted RBP19.31■□□□□ 0.68
SREK1-216ENST00000612404 NFRKBQ6P4R8 1299 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 SYCP3Q8IZU3 236 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 EEF2KMTQ96G04 330 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 DUSP9Q99956 384 aaKnown RBP19.31■□□□□ 0.68
SREK1-216ENST00000612404 STRA6Q9BX79 667 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 HSD3B7Q9H2F3 369 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 HDAC6Q9UBN7 1215 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 UBE4BO95155 1302 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 ADGRA3Q8IWK6 1321 aa19.31■□□□□ 0.68
SREK1-216ENST00000612404 PPP1R37O75864 691 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 HSPA1AP0DMV8 641 aaKnown RBP19.3■□□□□ 0.68
SREK1-216ENST00000612404 HSPA1BP0DMV9 641 aaKnown RBP19.3■□□□□ 0.68
SREK1-216ENST00000612404 CDK11BP21127 795 aaKnown RBP19.3■□□□□ 0.68
SREK1-216ENST00000612404 GTF2BQ00403 316 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 CAPSQ13938 189 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 CCSAPQ6IQ19 270 aaPredicted RBP19.3■□□□□ 0.68
SREK1-216ENST00000612404 CTU1Q7Z7A3 348 aaKnown RBP19.3■□□□□ 0.68
SREK1-216ENST00000612404 SRRTQ9BXP5 876 aaKnown RBP19.3■□□□□ 0.68
SREK1-216ENST00000612404 ST6GALNAC4Q9H4F1 302 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 AKT3Q9Y243 479 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 SRGAP2CP0DJJ0 459 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 NBPF20Q3BBV1 942 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 VTI1AQ96AJ9 217 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 ACCSQ96QU6 501 aa19.3■□□□□ 0.68
SREK1-216ENST00000612404 C17orf102A2RUQ5 167 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 H0YCG3 227 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 ATP1A3P13637 1013 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 CTCFP49711 727 aaPredicted RBP19.29■□□□□ 0.68
SREK1-216ENST00000612404 MTFR1Q15390 333 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 ZCWPW2Q504Y3 356 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 CREBRFQ8IUR6 639 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 RNF149Q8NC42 400 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 ANP32BQ92688 251 aaKnown RBP19.29■□□□□ 0.68
SREK1-216ENST00000612404 ZNF668Q96K58 619 aaPredicted RBP19.29■□□□□ 0.68
SREK1-216ENST00000612404 MAP7D2Q96T17 732 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 IKZF4Q9H2S9 585 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 TYW1Q9NV66 732 aaKnown RBP19.29■□□□□ 0.68
SREK1-216ENST00000612404 TBX20Q9UMR3 447 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 SCN10AQ9Y5Y9 1956 aa19.29■□□□□ 0.68
SREK1-216ENST00000612404 PDXKO00764 312 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 GNAT1P11488 350 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 FAM47CQ5HY64 1035 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 LINC01465Q8N7H1 131 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 NLRP4Q96MN2 994 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 TMEM206Q9H813 350 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 ARHGAP28Q9P2N2 729 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 ZMYM2Q9UBW7 1377 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 AP5Z1O43299 807 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 CALUO43852 315 aaPredicted RBP19.28■□□□□ 0.68
SREK1-216ENST00000612404 VTNP04004 478 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 ACLYP53396 1101 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 ZNF200P98182 395 aaPredicted RBP19.28■□□□□ 0.68
SREK1-216ENST00000612404 TFDP1Q14186 410 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 HIC1Q14526 733 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 PPP1R16BQ96T49 567 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 FAM49AQ9H0Q0 323 aaPredicted RBP19.28■□□□□ 0.68
SREK1-216ENST00000612404 GBP3Q9H0R5 595 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 RNF208Q9H0X6 261 aa19.28■□□□□ 0.68
SREK1-216ENST00000612404 ASAP2O43150 1006 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 TREHO43280 583 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 CYP2C9P11712 490 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 CCL5P13501 91 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 ZNF18P17022 549 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 HS2ST1Q7LGA3 356 aa19.27■□□□□ 0.68
SREK1-216ENST00000612404 ARRDC4Q8NCT1 418 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms