RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 INSRRP14616 1297 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 HOXA13P31271 388 aaPredicted RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CA8P35219 290 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TCF7P36402 384 aaPredicted RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MAGEA9P43362 315 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CLCN4P51793 760 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FZD5Q13467 585 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SNW1Q13573 536 aaKnown RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 HTR4Q13639 388 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GIT2Q14161 759 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 DSC3Q14574 896 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 BMS1Q14692 1282 aaKnown RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PPFIBP1Q86W92 1011 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LRRC43Q8N309 656 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CMASQ8NFW8 434 aaPredicted RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GATA6Q92908 595 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TTC14Q96N46 770 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MYL10Q9BUA6 226 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CDHR5Q9HBB8 845 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LTB4R2Q9NPC1 389 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ST3GAL5Q9UNP4 418 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PCDHA1Q9Y5I3 950 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MAST4O15021 2626 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ASH1LQ9NR48 2969 aaKnown RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TTC41PQ6P2S7 1318 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ADAMTS20P59510 1910 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 MYH15Q9Y2K3 1946 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 DENND3A2RUS2 1198 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RRN3P2A6NIE6 340 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 BHMG1C9JSJ3 638 aaPredicted RBP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RPS6KA5O75582 802 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 IGHDP01880 384 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 LAMP2P13473 410 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 MARK3P27448 753 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 METAP2P50579 478 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 IGBP1P78318 339 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 KRT76Q01546 638 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SP4Q02446 784 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 PRKCQQ04759 706 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 UBXN2BQ14CS0 331 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 MLF2Q15773 248 aaPredicted RBP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 GNPTABQ3T906 1256 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SLC44A4Q53GD3 710 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ANKRD45Q5TZF3 282 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 DDX53Q86TM3 631 aaKnown RBP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 TMEM173Q86WV6 379 aaPredicted RBP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 NME8Q8N427 588 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SAMD3Q8N6K7 520 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ST13P5Q8NFI4 369 aaPredicted RBP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 STAMQ92783 540 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 KLHL5Q96PQ7 755 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SENP7Q9BQF6 1050 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 LSM14BQ9BX40 385 aaKnown RBP8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 JMJD4Q9H9V9 463 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RXFP3Q9NSD7 469 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ERAP1Q9NZ08 941 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RAB23Q9ULC3 237 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 NUMBLQ9Y6R0 609 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ZZEF1O43149 2961 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CLUHO75153 1309 aa8.27□□□□□ -1.09
PTCHD3P1-201ENST00000612350 DOCK6Q96HP0 2047 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 HOXA2O43364 376 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 FIBPO43427 364 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 FOXD2O60548 495 aaPredicted RBP8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 PPP1R11O60927 126 aaPredicted RBP8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 LILRB3O75022 631 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 STAM2O75886 525 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 PAPLNO95428 1278 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 NCLP19338 710 aaKnown RBP8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CD72P21854 359 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RPS9P46781 194 aaKnown RBP8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 POLGP54098 1239 aaPredicted RBP8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 BCAR1P56945 870 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 NUCB1Q02818 461 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CLLU1OSQ5K130 101 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ZBTB41Q5SVQ8 909 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RSPO2Q6UXX9 243 aaPredicted RBP8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CYP26C1Q6V0L0 522 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CHD1LQ86WJ1 897 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 TMEM87AQ8NBN3 555 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SEPT1Q8WYJ6 367 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ADAM33Q9BZ11 813 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SMARCAD1Q9H4L7 1026 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ECHDC1Q9NTX5 307 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 RTEL1Q9NZ71 1219 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 GREB1Q4ZG55 1949 aa8.26□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SDK1Q7Z5N4 2213 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CCDC195A0A1B0GUA6 201 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SMIM35A0A1B0GVV1 85 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SHISA7A6NL88 538 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 GPR182O15218 404 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SMARCA5O60264 1052 aaPredicted RBP8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ATP9AO75110 1047 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 TOP3BO95985 862 aaKnown RBP8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 CNPP09543 421 aaKnown RBP8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 SPINK2P20155 84 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 MX1P20591 662 aa8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 TARSP26639 723 aaKnown RBP8.25□□□□□ -1.09
PTCHD3P1-201ENST00000612350 ALDH7A1P49419 539 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms