RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PTGISQ16647 500 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 SRRM1Q8IYB3 904 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 TGS1Q96RS0 853 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 TUFT1Q9NNX1 390 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 TBX3O15119 743 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 TTI1O43156 1089 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 PHF2O75151 1096 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 CPP00450 1065 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 SLC12A2P55011 1212 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 ACTN3Q08043 901 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 SEPT6Q14141 434 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 FBXW10Q5XX13 1052 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 TTI2Q6NXR4 508 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 KSR1Q8IVT5 923 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 ANKS1AQ92625 1134 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 FGFR1OP2Q9NVK5 253 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 KCNQ4P56696 695 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 TFDP1Q14186 410 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SEC23AQ15436 765 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 TBC1D10BQ4KMP7 808 aaPredicted RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SLFN12LQ6IEE8 588 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM55Q9BYV6 548 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ECT2Q9H8V3 914 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 DBNDD1Q9H9R9 158 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SMARCAL1Q9NZC9 954 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 PSAPP07602 524 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SERPINB6P35237 376 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ARL4CP56559 192 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ATG16L1Q676U5 607 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ADAM22Q9P0K1 906 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 INTUQ9ULD6 942 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 PITPNM2Q9BZ72 1349 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZNF335Q9H4Z2 1342 aaPredicted RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 A6NJR5 290 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 RTN2O75298 545 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 GALCP54803 685 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SNAP25P60880 206 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SURF1Q15526 300 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ENOSF1Q7L5Y1 443 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 CYFIP2Q96F07 1278 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 NTSR2O95665 410 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZNF543Q08ER8 600 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 PPP2R5DQ14738 602 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 KRT39Q6A163 491 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 C16orf86Q6ZW13 317 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRMT10CQ7L0Y3 403 aaKnown RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 FBXO33Q7Z6M2 555 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SLC35G2Q8TBE7 412 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 XPO6Q96QU8 1125 aaKnown RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 SUCLA2Q9P2R7 463 aaPredicted RBP11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 GJA3Q9Y6H8 435 aa11.69□□□□□ -0.54
CDC42EP3-206ENST00000611976 GOLGA8SH3BPF8 625 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 AKR1B1P15121 316 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 KLRC1P26715 233 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 DYNLT1P63172 113 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 KLHL38Q2WGJ6 581 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 BBS9Q3SYG4 887 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 DARS2Q6PI48 645 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM59Q8IWR1 403 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 GOLGA8QA0A0J9YX86 632 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 GOLGA8OA6NCC3 632 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 GOLGA8NF8WBI6 632 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 CRKP46108 304 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 PDE1BQ01064 536 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 FAM47EQ6ZV65 393 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 EXOC8Q8IYI6 725 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 KCTD17Q8N5Z5 321 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 KCTD6Q8NC69 237 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 LRRC37BQ96QE4 947 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 APEX2Q9UBZ4 518 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 MAD2L2Q9UI95 211 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 MEGF6O75095 1541 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 KIF1CO43896 1103 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 NPR1P16066 1061 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 RASA1P20936 1047 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 ADPGKQ9BRR6 497 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TBC1D22BQ9NU19 505 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZNF446Q9NWS9 450 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 PPP1R9AQ9ULJ8 1098 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 FLT1P17948 1338 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 NPHP3-ACAD11A0A0J9YXS1 232 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms