RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 COBLL1Q53SF7 1204 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 BCAS4Q8TDM0 211 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 SLC35B4Q969S0 331 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
PCDHGC3-202ENST00000611950 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 TARSL2A2RTX5 802 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 hCG_1984214I3L0E3 225 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 PPEF1O14829 653 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 NOL4O94818 638 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 MCM3P25205 808 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 PSMC6P62333 389 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 ADCY1Q08828 1119 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 IKQ13123 557 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 TTMPQ5BVD1 217 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 IQCEQ6IPM2 695 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 GJB7Q6PEY0 223 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 ARHGAP22Q7Z5H3 698 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 DDX42Q86XP3 938 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZNF713Q8N859 430 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 DNAJC19Q96DA6 116 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 CCDC114Q96M63 670 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 DNAAF2Q9NVR5 837 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 SERPINB13Q9UIV8 391 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 HACL1Q9UJ83 578 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 A0A1W2PQJ5 194 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 KLRG2A4D1S0 409 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 TTLL1O95922 423 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 TUBBP07437 444 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 SLC9A1P19634 815 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 KLHL30Q0D2K2 578 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 SLC9C1Q4G0N8 1177 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 MAP1SQ66K74 1059 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZFPM1Q8IX07 1006 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 SLC43A3Q8NBI5 491 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 RPGRIP1Q96KN7 1286 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 AP1M1Q9BXS5 423 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 RAB34Q9BZG1 259 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 SLC7A5P2Q9GIP4 190 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 GINM1Q9NU53 330 aa11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 DIS3Q9Y2L1 958 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-202ENST00000611950 PNMA6FA0A0J9YX94 578 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 CHUKO15111 745 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 CLIC2O15247 247 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 HOXD10P28358 340 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 HPDP32754 393 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 EPHX2P34913 555 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 CLK2P49760 499 aaKnown RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 IRAK1P51617 712 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 LBX1P52954 281 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 NFIAQ12857 509 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 ADAM9Q13443 819 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 TMEM119Q4V9L6 283 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 FBXW10Q5XX13 1052 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAAH2Q6GMR7 532 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 MTHFD1LQ6UB35 978 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 ADAT2Q7Z6V5 191 aaKnown RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 ATP11CQ8NB49 1132 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 OR2W6PQ8NHA6 318 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 LRRC27Q9C0I9 530 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 VIPAS39Q9H9C1 493 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 PVALEFA0A1B0GWK0 134 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 RSPH10B2B2RC85 870 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 KCNK3O14649 394 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 BACH1O14867 736 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 PLA2G4BP0C869 781 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 RSPH10BP0C881 870 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 TCP1P17987 556 aaKnown RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 PPP1R2P41236 205 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 PRR16Q569H4 304 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 GJC2Q5T442 439 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 THEMIS2Q5TEJ8 643 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 MIPOL1Q8TD10 442 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
PCDHGC3-202ENST00000611950 MED24O75448 989 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 ENPP1P22413 925 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 NR2F2P24468 414 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 GUCY1A3Q02108 690 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 KBTBD12Q3ZCT8 623 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 FIGNQ5HY92 759 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 KSR1Q8IVT5 923 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms