RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 PITPNM3Q9BZ71 974 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 SEMA6BQ9H3T3 888 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ZNF277Q9NRM2 450 aaPredicted RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 TYW1Q9NV66 732 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 MTMR4Q9NYA4 1195 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 AKT3Q9Y243 479 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 FNDC3AQ9Y2H6 1198 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 LAMA2P24043 3122 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 LOC102724159A0A0B4J2E5 919 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 TCRBV5S4A2TA0A5A2 114 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 E2F8A0AVK6 867 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 EVI5O60447 810 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CRCPO75575 148 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 SLC4A1P02730 911 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 POLD1P28340 1107 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 VAMP7P51809 220 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 PRELPP51888 382 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 TPD52P55327 224 aaPredicted RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 GPC5P78333 572 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 KCNB1Q14721 858 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 PWP2Q15269 919 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 TAF11Q15544 211 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 SLC27A3Q5K4L6 730 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 PLA2G4FQ68DD2 849 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 MMS22LQ6ZRQ5 1243 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 TRIM50Q86XT4 487 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 MCF2L2Q86YR7 1114 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 KIRREL3Q8IZU9 778 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 GLIS3Q8NEA6 775 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 NEDD1Q8NHV4 660 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ZNF473Q8WTR7 871 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 FAM149B1Q96BN6 582 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 RAB3IPQ96QF0 476 aaPredicted RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 WDR11Q9BZH6 1224 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 INTS13Q9NVM9 706 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 RNF14Q9UBS8 474 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ZBTB12Q9Y330 459 aaPredicted RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 ARHGEF28Q8N1W1 1705 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 PDS5AQ29RF7 1337 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 A0A087X0T9 212 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 IPO5O00410 1097 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 PSMD14O00487 310 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CAPN9O14815 690 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 RNF8O76064 485 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 FAM228BP0C875 321 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CHN1P15882 459 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 IRAK1P51617 712 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ITKQ08881 620 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 GRB10Q13322 594 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 SLC18A3Q16572 532 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 MCTP2Q6DN12 878 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 OR6B2Q6IFH4 312 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 SWSAP1Q6NVH7 229 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 PDXDC2PQ6P474 469 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 SPATS2Q86XZ4 545 aaKnown RBP4.08□□□□□ -1.76
RNF38-210ENST00000611646 TRIM59Q8IWR1 403 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ZBTB8OSQ8IWT0 167 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CDAN1Q8IWY9 1227 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 MCUQ8NE86 351 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 AGR3Q8TD06 166 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CASKIN2Q8WXE0 1202 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CCT8L2Q96SF2 557 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 RMDN3Q96TC7 470 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 TMEM206Q9H813 350 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 JMJD4Q9H9V9 463 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 CD248Q9HCU0 757 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ADAM22Q9P0K1 906 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 HEY1Q9Y5J3 304 aa4.08□□□□□ -1.76
RNF38-210ENST00000611646 ITIH6Q6UXX5 1313 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 DIP2BQ9P265 1576 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 TCP11X1B4DZS4 312 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 DKC1O60832 514 aaKnown RBP eCLIP4.07□□□□□ -1.76
RNF38-210ENST00000611646 SLC8A1P32418 973 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SOX5P35711 763 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ACOT2P49753 483 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SLC8A3P57103 927 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PDE1BQ01064 536 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 KRT17Q04695 432 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 MYO1EQ12965 1108 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CCDC14Q49A88 953 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SEZ6Q53EL9 994 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ARHGEF18Q6ZSZ5 1173 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 TMEM179Q6ZVK1 233 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CROCCP2Q86T23 111 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ZBED8Q8IZ13 594 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 NLGN1Q8N2Q7 840 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PDCD7Q8N8D1 485 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 TBC1D16Q8TBP0 767 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PPP1R36Q96LQ0 422 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 C9orf72Q96LT7 481 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 HEXIM2Q96MH2 286 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 TGS1Q96RS0 853 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 KLF6Q99612 283 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 C7orf25Q9BPX7 421 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 RIOK1Q9BRS2 568 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 CCSER1Q9C0I3 900 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 COA1Q9GZY4 146 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ATF5Q9Y2D1 282 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 VIRMAQ69YN4 1812 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms