RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 EXOSC10Q01780 885 aaKnown RBP17.83■□□□□ 0.44
HDDC2-203ENST00000608284 CLLU1OSQ5K130 101 aa17.83■□□□□ 0.44
HDDC2-203ENST00000608284 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
HDDC2-203ENST00000608284 ZNF668Q96K58 619 aaPredicted RBP17.83■□□□□ 0.44
HDDC2-203ENST00000608284 ZMYND12Q9H0C1 365 aa17.83■□□□□ 0.44
HDDC2-203ENST00000608284 RNF19AQ9NV58 838 aa17.83■□□□□ 0.44
HDDC2-203ENST00000608284 PLXNA4Q9HCM2 1894 aa17.83■□□□□ 0.44
HDDC2-203ENST00000608284 KIAA1671Q9BY89 1806 aa17.83■□□□□ 0.44
HDDC2-203ENST00000608284 GAS7O60861 476 aa17.82■□□□□ 0.44
HDDC2-203ENST00000608284 ZC3H11AO75152 810 aaKnown RBP eCLIP17.82■□□□□ 0.44
HDDC2-203ENST00000608284 PRKCEQ02156 737 aa17.82■□□□□ 0.44
HDDC2-203ENST00000608284 COL9A3Q14050 684 aaPredicted RBP17.82■□□□□ 0.44
HDDC2-203ENST00000608284 TWF2Q6IBS0 349 aaKnown RBP17.82■□□□□ 0.44
HDDC2-203ENST00000608284 KIAA1841Q6NSI8 718 aa17.82■□□□□ 0.44
HDDC2-203ENST00000608284 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
HDDC2-203ENST00000608284 CYP26B1Q9NR63 512 aa17.82■□□□□ 0.44
HDDC2-203ENST00000608284 CHMP2AO43633 222 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
HDDC2-203ENST00000608284 ELMSAN1Q6PJG2 1045 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 OTOP3Q7RTS5 596 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
HDDC2-203ENST00000608284 ZNF598Q86UK7 904 aaKnown RBP17.81■□□□□ 0.44
HDDC2-203ENST00000608284 C12orf76Q8N812 135 aaPredicted RBP17.81■□□□□ 0.44
HDDC2-203ENST00000608284 FLCNQ8NFG4 579 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 CCDC148Q8NFR7 591 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 CRYGNQ8WXF5 182 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 NKD2Q969F2 451 aaPredicted RBP17.81■□□□□ 0.44
HDDC2-203ENST00000608284 PGBD4Q96DM1 585 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 RIT2Q99578 217 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 TEKT3Q9BXF9 490 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 EMILIN2Q9BXX0 1053 aa17.81■□□□□ 0.44
HDDC2-203ENST00000608284 FNDC1Q4ZHG4 1894 aaPredicted RBP17.81■□□□□ 0.44
HDDC2-203ENST00000608284 LOXHD1Q8IVV2 1947 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 ASGR2P07307 311 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 WEE2P0C1S8 567 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 CTSAP10619 480 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 FGFR4P22455 802 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 CDC27P30260 824 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 CIITAP33076 1130 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 NBL1P41271 181 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 PHKA2P46019 1235 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 RAB27AP51159 221 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 USP11P51784 963 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 NOMO2Q5JPE7 1267 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 LRCH2Q5VUJ6 765 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 LINC01465Q8N7H1 131 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 TMEM105Q8N8V8 129 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 URGCPQ8TCY9 931 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 FAM193BQ96PV7 902 aaPredicted RBP17.8■□□□□ 0.44
HDDC2-203ENST00000608284 JPH2Q9BR39 696 aaPredicted RBP17.8■□□□□ 0.44
HDDC2-203ENST00000608284 SEPT9Q9UHD8 586 aaPredicted RBP17.8■□□□□ 0.44
HDDC2-203ENST00000608284 CDH22Q9UJ99 828 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 FBXL21Q9UKT6 434 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 IRAK3Q9Y616 596 aa17.8■□□□□ 0.44
HDDC2-203ENST00000608284 PRPF3O43395 683 aaKnown RBP17.79■□□□□ 0.44
HDDC2-203ENST00000608284 KLRC2P26717 231 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 XKR3Q5GH77 459 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 TMC5Q6UXY8 1006 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 CCDC149Q6ZUS6 474 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 MIER3Q7Z3K6 550 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 RDM1Q8NG50 284 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 IGSF21Q96ID5 467 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 ZBP1Q9H171 429 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 SFXN1Q9H9B4 322 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 FAM217BQ9NTX9 383 aaPredicted RBP17.79■□□□□ 0.44
HDDC2-203ENST00000608284 DPP7Q9UHL4 492 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 PIN4Q9Y237 131 aaKnown RBP17.79■□□□□ 0.44
HDDC2-203ENST00000608284 INPP5FQ9Y2H2 1132 aa17.79■□□□□ 0.44
HDDC2-203ENST00000608284 USP34Q70CQ2 3546 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 PRR23AA6NEV1 266 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 STK25O00506 426 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 ZNF862O60290 1169 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 EPCAMP16422 314 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 RFX1P22670 979 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 TDGQ13569 410 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 NONOQ15233 471 aaKnown RBP eCLIP17.78■□□□□ 0.44
HDDC2-203ENST00000608284 MTERF2Q49AM1 385 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 ASCL5Q7RTU5 278 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 CATSPER4Q7RTX7 472 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 ZNF410Q86VK4 478 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 AUTS2Q8WXX7 1259 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 RTP3Q9BQQ7 232 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 TRAIPQ9BWF2 469 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 GBP3Q9H0R5 595 aa17.78■□□□□ 0.44
HDDC2-203ENST00000608284 SUCLA2Q9P2R7 463 aaPredicted RBP17.78■□□□□ 0.44
HDDC2-203ENST00000608284 EVPLQ92817 2033 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 DDX11L8A8MPP1 907 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 MSH4O15457 936 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 CSDE1O75534 798 aaKnown RBP17.77■□□□□ 0.44
HDDC2-203ENST00000608284 ALDH2P05091 517 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 GALTP07902 379 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 RHPN2Q8IUC4 686 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 EXOC8Q8IYI6 725 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 NIFKQ9BYG3 293 aaKnown RBP17.77■□□□□ 0.44
HDDC2-203ENST00000608284 KANSL3Q9P2N6 904 aa17.77■□□□□ 0.44
HDDC2-203ENST00000608284 SSX2IPQ9Y2D8 614 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms