RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 ASAP3Q8TDY4 903 aa12.29□□□□□ -0.44
CTCFL-214ENST00000608108 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
CTCFL-214ENST00000608108 PSPC1Q8WXF1 523 aaKnown RBP12.29□□□□□ -0.44
CTCFL-214ENST00000608108 VTI1AQ96AJ9 217 aa12.29□□□□□ -0.44
CTCFL-214ENST00000608108 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
CTCFL-214ENST00000608108 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CTCFL-214ENST00000608108 GTF2IRD1Q9UHL9 959 aa12.29□□□□□ -0.44
CTCFL-214ENST00000608108 PSMA7O14818 248 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 MYBP10242 640 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 MAPTP10636 758 aaKnown RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 PPP1R2P41236 205 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 NAMPTP43490 491 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 ADAM17P78536 824 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 ZNF200P98182 395 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 STXBP4Q6ZWJ1 553 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 EPM2AIP1Q7L775 607 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 ZNF720Q7Z2F6 126 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 GUF1Q8N442 669 aaKnown RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 RNF214Q8ND24 703 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 FAM200AQ8TCP9 573 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 U2AF1L4Q8WU68 220 aaKnown RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 SCFD1Q8WVM8 642 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 PRPF31Q8WWY3 499 aaKnown RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 BPIFA3Q9BQP9 254 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 KMT5AQ9NQR1 393 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 STARD7Q9NQZ5 370 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 KCNG1Q9UIX4 513 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 AKT3Q9Y243 479 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-214ENST00000608108 GRIN2DO15399 1336 aa12.28□□□□□ -0.44
CTCFL-214ENST00000608108 LRRIQ4A6NIV6 560 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 EIF3DO15371 548 aaKnown RBP eCLIP12.27□□□□□ -0.44
CTCFL-214ENST00000608108 SLC16A4O15374 487 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 TREHO43280 583 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 KIF20AO95235 890 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 GJB1P08034 283 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 CYP2C9P11712 490 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 NCKAP1LP55160 1127 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 PAK1Q13153 545 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 ITGA7Q13683 1181 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 CAPSQ13938 189 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 ZC2HC1CQ53FD0 456 aaPredicted RBP12.27□□□□□ -0.44
CTCFL-214ENST00000608108 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.44
CTCFL-214ENST00000608108 HAUS6Q7Z4H7 955 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 SESTD1Q86VW0 696 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 KSR1Q8IVT5 923 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 NELFBQ8WX92 580 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.44
CTCFL-214ENST00000608108 CBX8Q9HC52 389 aa12.27□□□□□ -0.44
CTCFL-214ENST00000608108 UBE4BO95155 1302 aa12.27□□□□□ -0.45
CTCFL-214ENST00000608108 ADGRA3Q8IWK6 1321 aa12.27□□□□□ -0.45
CTCFL-214ENST00000608108 SMIM35A0A1B0GVV1 85 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 H0YCG3 227 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 PRPF6O94906 941 aaKnown RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 SGPL1O95470 568 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 STX17P56962 302 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 ALCAMQ13740 583 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 TFDP1Q14186 410 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 BMT2Q1RMZ1 405 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 GDF6Q6KF10 455 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 RUFY4Q6ZNE9 571 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 KIAA0319LQ8IZA0 1049 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 RNF149Q8NC42 400 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 DEPTORQ8TB45 409 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 DHTKD1Q96HY7 919 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 NTPCRQ9BSD7 190 aaKnown RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 MCOLN1Q9GZU1 580 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 ST6GALNAC4Q9H4F1 302 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 A0A0U1RQG5 324 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 DENND3A2RUS2 1198 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 TRIM49BA6NDI0 452 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 ASAP2O43150 1006 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 PPP1R37O75864 691 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 VTNP04004 478 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 GTF2BQ00403 316 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 GSE1Q14687 1217 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 TAF2Q6P1X5 1199 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 LUZP1Q86V48 1076 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 DHX40Q8IX18 779 aaKnown RBP12.26□□□□□ -0.45
CTCFL-214ENST00000608108 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 ZNF507Q8TCN5 953 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 P2RX5Q93086 422 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 PPP1R16BQ96T49 567 aa12.26□□□□□ -0.45
CTCFL-214ENST00000608108 STRA6Q9BX79 667 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms