RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 EXOC7Q9UPT5 735 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.67■■□□□ 1.38
USP6NL-204ENST00000606752 H0YCG3 227 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 MAFO75444 373 aaPredicted RBP23.67■■□□□ 1.38
USP6NL-204ENST00000606752 ABCD1P33897 745 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 ARL2P36404 184 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 CASP4P49662 377 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 PPP2R3AQ06190 1150 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 C17orf53Q8N3J3 647 aaPredicted RBP23.67■■□□□ 1.38
USP6NL-204ENST00000606752 TMEM143Q96AN5 459 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 BAG1Q99933 345 aaPredicted RBP23.67■■□□□ 1.38
USP6NL-204ENST00000606752 ARID2Q68CP9 1835 aa23.67■■□□□ 1.38
USP6NL-204ENST00000606752 DENND3A2RUS2 1198 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 ALDH1A1P00352 501 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 SMPD1P17405 629 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 TMEM139Q8IV31 216 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 MAP4K3Q8IVH8 894 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 C12orf56Q8IXR9 622 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 AFG1LQ8WV93 481 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 SOCS4Q8WXH5 440 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 KIFC3Q9BVG8 833 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 SPTLC3Q9NUV7 552 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 GJD2Q9UKL4 321 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 TNPO2O14787 897 aaKnown RBP23.66■■□□□ 1.38
USP6NL-204ENST00000606752 HBP1O60381 514 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 STX10O60499 249 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 RGS2P41220 211 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 KCNJ6P48051 423 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 NOGQ13253 232 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 FIGNQ5HY92 759 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 IQCDQ96DY2 449 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 PCMTD1Q96MG8 357 aaPredicted RBP23.66■■□□□ 1.38
USP6NL-204ENST00000606752 ERAP1Q9NZ08 941 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 ARHGAP28Q9P2N2 729 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 CAPN11Q9UMQ6 739 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 SIK3Q9Y2K2 1263 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 FRMD4BQ9Y2L6 1034 aa23.66■■□□□ 1.38
USP6NL-204ENST00000606752 TTC26A0AVF1 554 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 PPFIA4O75335 1185 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 TRIM21P19474 475 aaKnown RBP23.65■■□□□ 1.38
USP6NL-204ENST00000606752 SCP2P22307 547 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 PPP2R5AQ15172 486 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 FAM186BQ8IYM0 893 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 KCNN1Q92952 543 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 BORCS6Q96GS4 357 aa23.65■■□□□ 1.38
USP6NL-204ENST00000606752 LUC7L2Q9Y383 392 aaKnown RBP23.65■■□□□ 1.38
USP6NL-204ENST00000606752 RASSF10A6NK89 507 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 ZBTB42B2RXF5 422 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 RNF225M0QZC1 329 aaPredicted RBP23.64■■□□□ 1.38
USP6NL-204ENST00000606752 GAS2O43903 313 aaKnown RBP23.64■■□□□ 1.38
USP6NL-204ENST00000606752 LGALS2P05162 132 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 XRCC5P13010 732 aaKnown RBP23.64■■□□□ 1.38
USP6NL-204ENST00000606752 NAMPTP43490 491 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 KLK7P49862 253 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 CYP2J2P51589 502 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 KCNH2Q12809 1159 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 OLFML2BQ68BL8 750 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 ASAP3Q8TDY4 903 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 TTYH3Q9C0H2 523 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 FLRT1Q9NZU1 646 aa23.64■■□□□ 1.38
USP6NL-204ENST00000606752 DOCK3Q8IZD9 2030 aa23.64■■□□□ 1.37
USP6NL-204ENST00000606752 ADGRA3Q8IWK6 1321 aa23.64■■□□□ 1.37
USP6NL-204ENST00000606752 ARHGAP6O43182 974 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 CYP2B6P20813 491 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 GLRA2P23416 452 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 KRT9P35527 623 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 NAA15Q9BXJ9 866 aaKnown RBP23.63■■□□□ 1.37
USP6NL-204ENST00000606752 TRPC6Q9Y210 931 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 EXOC3O60645 756 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 TNFAIP2Q03169 654 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 IER5Q5VY09 327 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 APBA2Q99767 749 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 JPH2Q9BR39 696 aaPredicted RBP23.63■■□□□ 1.37
USP6NL-204ENST00000606752 ABHD10Q9NUJ1 306 aa23.63■■□□□ 1.37
USP6NL-204ENST00000606752 IGKV6-21A0A0C4DH24 114 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 A0A1W2PQJ5 194 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 AFPP02771 609 aaKnown RBP23.62■■□□□ 1.37
USP6NL-204ENST00000606752 PRAMEF19Q5SWL8 479 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 CCDC155Q8N6L0 562 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 OR6J1Q8NGC5 347 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 OR8K1Q8NGG5 319 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 TCP11Q8WWU5 503 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 RNPEPQ9H4A4 650 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 MMRN2Q9H8L6 949 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 KCND1Q9NSA2 647 aa23.62■■□□□ 1.37
USP6NL-204ENST00000606752 TISP43B9A030 160 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 HOXD8P13378 290 aaPredicted RBP23.61■■□□□ 1.37
USP6NL-204ENST00000606752 FECHP22830 423 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 CNGA1P29973 690 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 KCNMA1Q12791 1236 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 CCL14Q16627 93 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 DEFB115Q30KQ5 88 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 DEPTORQ8TB45 409 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 CBWD1Q9BRT8 395 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 ZNF865P0CJ78 1059 aaPredicted RBP23.61■■□□□ 1.37
USP6NL-204ENST00000606752 CYP2C19P33261 490 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 BRDTQ58F21 947 aaPredicted RBP23.61■■□□□ 1.37
USP6NL-204ENST00000606752 DCAF17Q5H9S7 520 aaPredicted RBP23.61■■□□□ 1.37
USP6NL-204ENST00000606752 ZNF484Q5JVG2 852 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 REM2Q8IYK8 340 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms