RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 KIFAP3Q92845 792 aa17.76■□□□□ 0.43
PPFIA3-213ENST00000602905 EPSTI1Q96J88 318 aa17.76■□□□□ 0.43
PPFIA3-213ENST00000602905 IFT74Q96LB3 600 aa17.76■□□□□ 0.43
PPFIA3-213ENST00000602905 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 NCBP1Q09161 790 aaKnown RBP17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 RRAGBQ5VZM2 374 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 RINT1Q6NUQ1 792 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 CATSPER4Q7RTX7 472 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 SPATA32Q96LK8 384 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 SCAND2PQ9GZW5 306 aaPredicted RBP17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 KCND2Q9NZV8 630 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 RCOR1Q9UKL0 485 aa17.75■□□□□ 0.43
PPFIA3-213ENST00000602905 TTC3P53804 2025 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 LRRIQ4A6NIV6 560 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 ENPP3O14638 875 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 GLRA2P23416 452 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 DEFB103AP81534 67 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 HERC6Q8IVU3 1022 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 ZBTB8OSQ8IWT0 167 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 ASAP3Q8TDY4 903 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 DRC1Q96MC2 740 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 C2orf40Q9H1Z8 148 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 GPRC5CQ9NQ84 441 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 C1orf112Q9NSG2 853 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 FAM13BQ9NYF5 915 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 KCNG1Q9UIX4 513 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 CIZ1Q9ULV3 898 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 PTPRSQ13332 1948 aa17.74■□□□□ 0.43
PPFIA3-213ENST00000602905 GRXCR1A8MXD5 290 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 ERLIN2O94905 339 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 KRT18P05783 430 aaKnown RBP17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 STAG3L1P0CL83 205 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 DDIT3P35638 169 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 STAT6P42226 847 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 PTENP60484 403 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 CAPSQ13938 189 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 DHX8Q14562 1220 aaKnown RBP17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 PCBP1Q15365 356 aaKnown RBP eCLIP17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 C1orf186Q6ZWK4 172 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 USP49Q70CQ1 688 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 DEPTORQ8TB45 409 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 LARP4BQ92615 738 aaKnown RBP17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 RAD54LQ92698 747 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 ADAM2Q99965 735 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 TSPYL2Q9H2G4 693 aaPredicted RBP17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 IFT122Q9HBG6 1241 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 DACT1Q9NYF0 836 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 LRFN2Q9ULH4 789 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 PCDHA11Q9Y5I1 949 aa17.73■□□□□ 0.43
PPFIA3-213ENST00000602905 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 TLL1O43897 1013 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 HIP1RO75146 1068 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 CSDE1O75534 798 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 UPP2O95045 317 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 FGFR4P22455 802 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 GUCY2CP25092 1073 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 NAMPTP43490 491 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 FXR1P51114 621 aaKnown RBP eCLIP17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 SLC12A3P55017 1021 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 FAM109BQ6ICB4 259 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 GPR153Q6NV75 609 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 FAM117BQ6P1L5 589 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 GPBP1Q86WP2 473 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 LEO1Q8WVC0 666 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 TOP1MTQ969P6 601 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 RUSC1Q9BVN2 902 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 NFKBIZQ9BYH8 718 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 TMX1Q9H3N1 280 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 CHST12Q9NRB3 414 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 PCDHA7Q9UN72 937 aa17.72■□□□□ 0.43
PPFIA3-213ENST00000602905 SOX1O00570 391 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 GJB5O95377 273 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 IBSPP21815 317 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 DNAJB2P25686 324 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 SARSP49591 514 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 RABGGTBP53611 331 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 DMP1Q13316 513 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 MCM6Q14566 821 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 SLC24A5Q71RS6 500 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 SV2BQ7L1I2 683 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 IFNLR1Q8IU57 520 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 TIFAQ96CG3 184 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 LRCH3Q96II8 777 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 RAD9AQ99638 391 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 PYM1Q9BRP8 204 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 PBX4Q9BYU1 374 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 C17orf75Q9HAS0 396 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 RGS18Q9NS28 235 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 BLOC1S4Q9NUP1 217 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 PIN4Q9Y237 131 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 INSL6Q9Y581 213 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 MYO9BQ13459 2157 aa17.71■□□□□ 0.43
PPFIA3-213ENST00000602905 CCDC169A6NNP5 214 aa17.7■□□□□ 0.42
PPFIA3-213ENST00000602905 SKIP12755 728 aa17.7■□□□□ 0.42
PPFIA3-213ENST00000602905 AXLP30530 894 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms