RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ZSCAN9O15535 394 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 ESRRBO95718 433 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 SARM1Q6SZW1 724 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 GDF11O95390 407 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 CCNA1P78396 465 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 RBBP7Q16576 425 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 SULF1Q8IWU6 871 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 DAB1O75553 588 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 ZRANB2O95218 330 aaKnown RBP eCLIP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 EIF4E1BA6NMX2 242 aaKnown RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 IL10P22301 178 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 AP5M1Q9H0R1 490 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 HDAC6Q9UBN7 1215 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 IFNAR1P17181 557 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 GUCY1A3Q02108 690 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 GFM2Q969S9 779 aaKnown RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 VPS11Q9H270 941 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 CFAP69A5D8W1 941 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 KRT8P05787 483 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 MXD4Q14582 209 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 ACBD5Q5T8D3 534 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 MAGEB5Q9BZ81 275 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 OCM2P0CE71 109 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 OCMP0CE72 109 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-217ENST00000602723 ZNF699Q32M78 642 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 LRRC8EQ6NSJ5 796 aa10.22□□□□□ -0.77
CSMD1-217ENST00000602723 UBN2Q6ZU65 1347 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 EFCAB14O75071 495 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 NDUFAF2Q8N183 169 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 ATP11CQ8NB49 1132 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 COA7Q96BR5 231 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 SERPINB13Q9UIV8 391 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 LRRC53A6NM62 1247 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 ADD2P35612 726 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
CSMD1-217ENST00000602723 STAMBPL1Q96FJ0 436 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 TAF1DQ9H5J8 278 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-217ENST00000602723 EHD2Q9NZN4 543 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 LRFN2Q9ULH4 789 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 ESYT3A0FGR9 886 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 ANO9A1A5B4 782 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 H0Y626 953 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 TRIM16O95361 564 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 CHRNA3P32297 505 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 HEMGNQ9BXL5 484 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 GCOM2Q9BZD3 368 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-217ENST00000602723 GFAPP14136 432 aa10.21□□□□□ -0.77
CSMD1-217ENST00000602723 HOXA13P31271 388 aaPredicted RBP10.21□□□□□ -0.77
CSMD1-217ENST00000602723 KCNQ3O43525 872 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 GPC5P78333 572 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 DEPDC1Q5TB30 811 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 NLRP4Q96MN2 994 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 SLC13A1Q9BZW2 595 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 CNOT8Q9UFF9 292 aaKnown RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 MAP4P27816 1152 aaKnown RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 CARSP49589 748 aaKnown RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 USP14P54578 494 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 KIAA1755Q5JYT7 1200 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 UNC13DQ70J99 1090 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 PPM1NQ8N819 430 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 ULK4Q96C45 1275 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 MMTAG2Q9BU76 263 aaKnown RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 ADNPQ9H2P0 1102 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 ATP6V0A4Q9HBG4 840 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 PJA2O43164 708 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 LIFRP42702 1097 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 ARFIP2P53365 341 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 CTTNQ14247 550 aaKnown RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 MTERF2Q49AM1 385 aa10.21□□□□□ -0.78
CSMD1-217ENST00000602723 DCPSQ96C86 337 aaKnown RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 OTUB1Q96FW1 271 aaPredicted RBP10.21□□□□□ -0.78
CSMD1-217ENST00000602723 ZSCAN20P17040 1043 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 TMEM270Q6UE05 265 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 EPN3Q9H201 632 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ASNSD1Q9NWL6 643 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 DNAJC12Q9UKB3 198 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 HPCAL4Q9UM19 191 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 GDAQ9Y2T3 454 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ARID1BQ8NFD5 2236 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 E5RI56 91 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 STXBP3O00186 592 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 LBRQ14739 615 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF564Q8TBZ8 553 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 GANCQ8TET4 914 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 COPG1Q9Y678 874 aaKnown RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 GOLGA8IPA6NC78 632 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 GOLGA8JA6NMD2 632 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-217ENST00000602723 BMP3P12645 472 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 POU5F1BQ06416 359 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 CEP55Q53EZ4 464 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 KIF20BQ96Q89 1820 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 FBXW4P57775 412 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 ROR1Q01973 937 aa10.2□□□□□ -0.78
CSMD1-217ENST00000602723 NAALADL2Q58DX5 795 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms