RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 CHST12Q9NRB3 414 aa29.11■■■□□ 2.25
PNKP-216ENST00000601816 TYW1Q9NV66 732 aaKnown RBP29.11■■■□□ 2.25
PNKP-216ENST00000601816 COL4A3BPQ9Y5P4 624 aa29.11■■■□□ 2.25
PNKP-216ENST00000601816 BRWD1Q9NSI6 2320 aa29.11■■■□□ 2.25
PNKP-216ENST00000601816 A0A0U1RQF3 1178 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 NCK2O43639 380 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 GAS2O43903 313 aaKnown RBP29.1■■■□□ 2.25
PNKP-216ENST00000601816 SLITRK3O94933 977 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 MCM7P33993 719 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 RABEP1Q15276 862 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 EP400NLQ6ZTU2 488 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 POF1BQ8WVV4 589 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 TMEM143Q96AN5 459 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 FOXP1Q9H334 677 aaPredicted RBP29.1■■■□□ 2.25
PNKP-216ENST00000601816 BMP2KQ9NSY1 1161 aaPredicted RBP29.1■■■□□ 2.25
PNKP-216ENST00000601816 RNF19AQ9NV58 838 aa29.1■■■□□ 2.25
PNKP-216ENST00000601816 DNAJB1P25685 340 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 CAMK1Q14012 370 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 COL19A1Q14993 1142 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 EMC2Q15006 297 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 FBXO18Q8NFZ0 1043 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 TCP11Q8WWU5 503 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 HSD17B14Q9BPX1 270 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 TMEM60Q9H2L4 133 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 HCSTQ9UBK5 93 aa29.09■■■□□ 2.25
PNKP-216ENST00000601816 ATG2AQ2TAZ0 1938 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 ZBTB39O15060 712 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 LYPLA2O95372 231 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 EOMESO95936 686 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 LAG3P18627 525 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 CSPP1Q1MSJ5 1256 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 CATSPER4Q7RTX7 472 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 COLGALT1Q8NBJ5 622 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 PRPF31Q8WWY3 499 aaKnown RBP29.08■■■□□ 2.25
PNKP-216ENST00000601816 PPP2R3CQ969Q6 453 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 CASD1Q96PB1 797 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 CWH43Q9H720 699 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 CLDND1Q9NY35 253 aa29.08■■■□□ 2.25
PNKP-216ENST00000601816 PIN4Q9Y237 131 aaKnown RBP29.08■■■□□ 2.25
PNKP-216ENST00000601816 HYAL1Q12794 435 aa29.07■■■□□ 2.24
PNKP-216ENST00000601816 GNL2Q13823 731 aaKnown RBP29.07■■■□□ 2.24
PNKP-216ENST00000601816 TWF2Q6IBS0 349 aaKnown RBP29.07■■■□□ 2.24
PNKP-216ENST00000601816 ZNF598Q86UK7 904 aaKnown RBP29.07■■■□□ 2.24
PNKP-216ENST00000601816 THNSL1Q8IYQ7 743 aa29.07■■■□□ 2.24
PNKP-216ENST00000601816 LRRC43Q8N309 656 aa29.07■■■□□ 2.24
PNKP-216ENST00000601816 MTRQ99707 1265 aa29.07■■■□□ 2.24
PNKP-216ENST00000601816 UPF2Q9HAU5 1272 aaKnown RBP29.07■■■□□ 2.24
PNKP-216ENST00000601816 IFT122Q9HBG6 1241 aa29.07■■■□□ 2.24
PNKP-216ENST00000601816 H3BQ06 376 aaPredicted RBP29.06■■■□□ 2.24
PNKP-216ENST00000601816 SRGAP2CP0DJJ0 459 aa29.06■■■□□ 2.24
PNKP-216ENST00000601816 UBE3AQ05086 875 aa29.06■■■□□ 2.24
PNKP-216ENST00000601816 LAMTOR4Q0VGL1 99 aa29.06■■■□□ 2.24
PNKP-216ENST00000601816 ORC2Q13416 577 aaPredicted RBP29.06■■■□□ 2.24
PNKP-216ENST00000601816 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.06■■■□□ 2.24
PNKP-216ENST00000601816 CCDC43Q96MW1 224 aaKnown RBP29.06■■■□□ 2.24
PNKP-216ENST00000601816 TRAIPQ9BWF2 469 aa29.06■■■□□ 2.24
PNKP-216ENST00000601816 ANKEF1Q9NU02 776 aa29.06■■■□□ 2.24
PNKP-216ENST00000601816 MYO7AQ13402 2215 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 POTEMA6NI47 508 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 ST18O60284 1047 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 FGF18O76093 207 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 ATF7P17544 494 aaPredicted RBP29.05■■■□□ 2.24
PNKP-216ENST00000601816 IRS1P35568 1242 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 PHKA2P46019 1235 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 PUS10Q3MIT2 529 aaKnown RBP29.05■■■□□ 2.24
PNKP-216ENST00000601816 CLLU1OSQ5K130 101 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 SRGAP1Q7Z6B7 1085 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 ARID2Q68CP9 1835 aa29.05■■■□□ 2.24
PNKP-216ENST00000601816 ASAP2O43150 1006 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 SKIP12755 728 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 ZNF174Q15697 407 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 PTCRAQ6ISU1 281 aaPredicted RBP29.04■■■□□ 2.24
PNKP-216ENST00000601816 LRRC55Q6ZSA7 311 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 FERMT3Q86UX7 667 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 NOSTRINQ8IVI9 506 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 IGFLR1Q9H665 355 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 AGPAT5Q9NUQ2 364 aa29.04■■■□□ 2.24
PNKP-216ENST00000601816 OR52Z1P0C646 297 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 CTC1Q2NKJ3 1217 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 TTC38Q5R3I4 469 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 RNF149Q8NC42 400 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 HELQQ8TDG4 1101 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 ZNF558Q96NG5 402 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 XPNPEP1Q9NQW7 623 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 FAM105AQ9NUU6 356 aa29.03■■■□□ 2.24
PNKP-216ENST00000601816 NOL7Q9UMY1 257 aaKnown RBP29.03■■■□□ 2.24
PNKP-216ENST00000601816 PLXNA4Q9HCM2 1894 aa29.02■■■□□ 2.24
PNKP-216ENST00000601816 MUC3AQ02505 3323 aa29.02■■■□□ 2.24
PNKP-216ENST00000601816 DGAT1O75907 488 aa29.02■■■□□ 2.24
PNKP-216ENST00000601816 RAB27AP51159 221 aa29.02■■■□□ 2.24
PNKP-216ENST00000601816 MRPL9Q9BYD2 267 aaKnown RBP29.02■■■□□ 2.24
PNKP-216ENST00000601816 TLR9Q9NR96 1032 aa29.02■■■□□ 2.24
PNKP-216ENST00000601816 GRXCR2A6NFK2 248 aa29.01■■■□□ 2.23
PNKP-216ENST00000601816 GTF2F1P35269 517 aaKnown RBP eCLIP29.01■■■□□ 2.23
PNKP-216ENST00000601816 PPM1AP35813 382 aa29.01■■■□□ 2.23
PNKP-216ENST00000601816 TRAPPC10P48553 1259 aa29.01■■■□□ 2.23
PNKP-216ENST00000601816 RARRES1P49788 294 aa29.01■■■□□ 2.23
PNKP-216ENST00000601816 MXD4Q14582 209 aaPredicted RBP29.01■■■□□ 2.23
PNKP-216ENST00000601816 KCNT2Q6UVM3 1135 aa29.01■■■□□ 2.23
PNKP-216ENST00000601816 ADGRD2Q7Z7M1 963 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms