RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 EPG5Q9HCE0 2579 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 IPO5O00410 1097 aaKnown RBP18.16■□□□□ 0.5
SSBP4-211ENST00000601614 CALM1P0DP23 149 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 CALM2P0DP24 149 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 CALM3P0DP25 149 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 DARSP14868 501 aaKnown RBP18.16■□□□□ 0.5
SSBP4-211ENST00000601614 ZNF76P36508 570 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 LIFRP42702 1097 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 GPC3P51654 580 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 FUT2Q10981 343 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 PTPN14Q15678 1187 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 LONRF3Q496Y0 759 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 OTOP3Q7RTS5 596 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 MICU3Q86XE3 530 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 TMTC2Q8N394 836 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 CRYGNQ8WXF5 182 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 RSAD2Q8WXG1 361 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
SSBP4-211ENST00000601614 LPPQ93052 612 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 MRPL9Q9BYD2 267 aaKnown RBP18.16■□□□□ 0.5
SSBP4-211ENST00000601614 SFXN1Q9H9B4 322 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 GABBR1Q9UBS5 961 aa18.16■□□□□ 0.5
SSBP4-211ENST00000601614 DOCK6Q96HP0 2047 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 GPR179Q6PRD1 2367 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 MAGEB2O15479 319 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 ZNF862O60290 1169 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 GALTP07902 379 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 CFHP08603 1231 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 MCM5P33992 734 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 ADCY7P51828 1080 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 POLGP54098 1239 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-211ENST00000601614 BMS1Q14692 1282 aaKnown RBP18.15■□□□□ 0.5
SSBP4-211ENST00000601614 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 TBC1D13Q9NVG8 400 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 DNAJB4Q9UDY4 337 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 SPTBN2O15020 2390 aa18.15■□□□□ 0.5
SSBP4-211ENST00000601614 SMCO2A6NFE2 343 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 KRT37O76014 449 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 CLCN4P51793 760 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 AP3B2Q13367 1082 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 DRP2Q13474 957 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 GIT2Q14161 759 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 LETM2Q2VYF4 491 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 JAKMIP3Q5VZ66 844 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 ZNF746Q6NUN9 644 aaPredicted RBP18.14■□□□□ 0.49
SSBP4-211ENST00000601614 PPP1R18Q6NYC8 613 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 DCLK2Q8N568 766 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 TMEM87AQ8NBN3 555 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 KLHL5Q96PQ7 755 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 CEP131Q9UPN4 1083 aa18.14■□□□□ 0.49
SSBP4-211ENST00000601614 KMT2BQ9UMN6 2715 aaPredicted RBP18.14■□□□□ 0.49
SSBP4-211ENST00000601614 CNPP09543 421 aaKnown RBP18.13■□□□□ 0.49
SSBP4-211ENST00000601614 PHKA2P46019 1235 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 SLC11A1P49279 550 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 ZNF577Q9BSK1 485 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 SEMA4AQ9H3S1 761 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 IGSF9Q9P2J2 1179 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 WNT16Q9UBV4 365 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 CA14Q9ULX7 337 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 PCDHA10Q9Y5I2 948 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 FRYLO94915 3013 aa18.13■□□□□ 0.49
SSBP4-211ENST00000601614 MTCL1Q9Y4B5 1905 aaKnown RBP18.13■□□□□ 0.49
SSBP4-211ENST00000601614 COL4A3Q01955 1670 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 MIA3Q5JRA6 1907 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 LILRB3O75022 631 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 SSBP05455 408 aaKnown RBP eCLIP18.12■□□□□ 0.49
SSBP4-211ENST00000601614 PSAPP07602 524 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 CYP3A4P08684 503 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 AAMPQ13685 434 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 PUM1Q14671 1186 aaKnown RBP eCLIP18.12■□□□□ 0.49
SSBP4-211ENST00000601614 UGCGQ16739 394 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 SGMS1Q86VZ5 419 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 PPFIBP1Q86W92 1011 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 ZNF280BQ86YH2 543 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 TBC1D17Q9HA65 648 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 DLL3Q9NYJ7 618 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 DLGAP2Q9P1A6 1054 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 INPP5FQ9Y2H2 1132 aa18.12■□□□□ 0.49
SSBP4-211ENST00000601614 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
SSBP4-211ENST00000601614 STK25O00506 426 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 OATP04181 439 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 DCNP07585 359 aaKnown RBP18.11■□□□□ 0.49
SSBP4-211ENST00000601614 TMOD1P28289 359 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 NOMO2Q5JPE7 1267 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 C15orf39Q6ZRI6 1047 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 TEX2Q8IWB9 1127 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 SMAP1Q8IYB5 467 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-211ENST00000601614 NLRP7Q8WX94 980 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 SCLT1Q96NL6 688 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 MYADMQ96S97 322 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 GBP3Q9H0R5 595 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 TBC1D22BQ9NU19 505 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 BARHL2Q9NY43 387 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
SSBP4-211ENST00000601614 PATJQ8NI35 1801 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 SLC27A2O14975 620 aa18.1■□□□□ 0.49
SSBP4-211ENST00000601614 OFD1O75665 1012 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms