RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 GRXCR2A6NFK2 248 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 H3BQ06 376 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-209ENST00000601357 ATF7P17544 494 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-209ENST00000601357 IRS1P35568 1242 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 CTTNQ14247 550 aaKnown RBP25.34■■□□□ 1.65
SSBP4-209ENST00000601357 PUS10Q3MIT2 529 aaKnown RBP25.34■■□□□ 1.65
SSBP4-209ENST00000601357 PTCRAQ6ISU1 281 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-209ENST00000601357 LRRC55Q6ZSA7 311 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 EXOC8Q8IYI6 725 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 COLGALT1Q8NBJ5 622 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 HSD17B14Q9BPX1 270 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 INO80BQ9C086 356 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-209ENST00000601357 CLDND1Q9NY35 253 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 DACT1Q9NYF0 836 aa25.34■■□□□ 1.65
SSBP4-209ENST00000601357 ZBTB39O15060 712 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 EOMESO95936 686 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 SFPQP23246 707 aaKnown RBP eCLIP25.33■■□□□ 1.65
SSBP4-209ENST00000601357 POLGP54098 1239 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-209ENST00000601357 CYP4A11Q02928 519 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 UBE3AQ05086 875 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 CLLU1OSQ5K130 101 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 OTUD6AQ7L8S5 288 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 ZSCAN31Q96LW9 406 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-209ENST00000601357 NLRP4Q96MN2 994 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 EIF2AK1Q9BQI3 630 aaKnown RBP25.33■■□□□ 1.65
SSBP4-209ENST00000601357 TTC12Q9H892 705 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-209ENST00000601357 COL4A3BPQ9Y5P4 624 aa25.33■■□□□ 1.65
SSBP4-209ENST00000601357 GAS2O43903 313 aaKnown RBP25.32■■□□□ 1.64
SSBP4-209ENST00000601357 FGF18O76093 207 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 CSPG5O95196 566 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 LYPLA2O95372 231 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 IL9P15248 144 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 LAG3P18627 525 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 GTF2F1P35269 517 aaKnown RBP eCLIP25.32■■□□□ 1.641e-6■■■■□ 26.2
SSBP4-209ENST00000601357 RBM25P49756 843 aaKnown RBP25.32■■□□□ 1.64
SSBP4-209ENST00000601357 GUCY1B3Q02153 619 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 CSPP1Q1MSJ5 1256 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 SPOUT1Q5T280 376 aaKnown RBP25.32■■□□□ 1.64
SSBP4-209ENST00000601357 ADGRD2Q7Z7M1 963 aa25.32■■□□□ 1.64
SSBP4-209ENST00000601357 PRPF31Q8WWY3 499 aaKnown RBP25.32■■□□□ 1.64
SSBP4-209ENST00000601357 EMC2Q15006 297 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 TPH2Q8IWU9 490 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 FAM178BQ8IXR5 827 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 LRRC43Q8N309 656 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 PSPC1Q8WXF1 523 aaKnown RBP25.31■■□□□ 1.64
SSBP4-209ENST00000601357 TMEM143Q96AN5 459 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 CD320Q9NPF0 282 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 SH2B1Q9NRF2 756 aaPredicted RBP25.31■■□□□ 1.64
SSBP4-209ENST00000601357 C5orf42Q9H799 3197 aa25.31■■□□□ 1.64
SSBP4-209ENST00000601357 TBX10O75333 385 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 TXKP42681 527 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 PHKA2P46019 1235 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 DLX2Q07687 328 aaPredicted RBP25.3■■□□□ 1.64
SSBP4-209ENST00000601357 ADAM15Q13444 863 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 SAFBQ15424 915 aaKnown RBP eCLIP25.3■■□□□ 1.64
SSBP4-209ENST00000601357 XKR9Q5GH70 373 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 ABI1Q8IZP0 508 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 RNF169Q8NCN4 708 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 C8orf76Q96K31 380 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 TMEM60Q9H2L4 133 aa25.3■■□□□ 1.64
SSBP4-209ENST00000601357 LINC01565O15544 149 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 HMGN5P82970 282 aaKnown RBP25.29■■□□□ 1.64
SSBP4-209ENST00000601357 PLCB3Q01970 1234 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 LAMTOR4Q0VGL1 99 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 EP400NLQ6ZTU2 488 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 THNSL1Q8IYQ7 743 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 FBXO18Q8NFZ0 1043 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 TCP11Q8WWU5 503 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 PPP2R3CQ969Q6 453 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 FOXP1Q9H334 677 aaPredicted RBP25.29■■□□□ 1.64
SSBP4-209ENST00000601357 XPNPEP1Q9NQW7 623 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 AGPAT5Q9NUQ2 364 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 PIN4Q9Y237 131 aaKnown RBP25.29■■□□□ 1.64
SSBP4-209ENST00000601357 LZTS1Q9Y250 596 aa25.29■■□□□ 1.64
SSBP4-209ENST00000601357 KCNT2Q6UVM3 1135 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 CATSPER4Q7RTX7 472 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 SRGAP1Q7Z6B7 1085 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 FERMT3Q86UX7 667 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 EFHBQ8N7U6 833 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 HELQQ8TDG4 1101 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 IGFLR1Q9H665 355 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 MINDY3Q9H8M7 445 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 TLR9Q9NR96 1032 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 BMP2KQ9NSY1 1161 aaPredicted RBP25.28■■□□□ 1.64
SSBP4-209ENST00000601357 ANKEF1Q9NU02 776 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 PCDHGC5Q9Y5F6 944 aa25.28■■□□□ 1.64
SSBP4-209ENST00000601357 FSCN2O14926 492 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 ASAP2O43150 1006 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 ZNF623O75123 536 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 MCM7P33993 719 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 TWF2Q6IBS0 349 aaKnown RBP25.27■■□□□ 1.64
SSBP4-209ENST00000601357 RSPH1Q8WYR4 309 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 ZNF558Q96NG5 402 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 MTRQ99707 1265 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 FAM105AQ9NUU6 356 aa25.27■■□□□ 1.64
SSBP4-209ENST00000601357 POTEMA6NI47 508 aa25.26■■□□□ 1.63
SSBP4-209ENST00000601357 SRGAP2CP0DJJ0 459 aa25.26■■□□□ 1.63
SSBP4-209ENST00000601357 SKIP12755 728 aa25.26■■□□□ 1.63
SSBP4-209ENST00000601357 NRIP1P48552 1158 aa25.26■■□□□ 1.63
SSBP4-209ENST00000601357 RAB27AP51159 221 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms