RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CDKAL1Q5VV42 579 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 EFCAB12Q6NXP0 572 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 LRRC71Q8N4P6 559 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 METTL13Q8N6R0 699 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 ASAP3Q8TDY4 903 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 ACCSQ96QU6 501 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 MTG1Q9BT17 334 aaPredicted RBP24.85■■□□□ 1.57
IRF3-228ENST00000601291 SRRTQ9BXP5 876 aaKnown RBP24.85■■□□□ 1.57
IRF3-228ENST00000601291 TRIM5Q9C035 493 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 NRCAMQ92823 1304 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 HAS3O00219 553 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 SMIM10L2AP0DMW4 78 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 SMIM10L2BP0DMW5 78 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 ATP1A3P13637 1013 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 KLRC1P26715 233 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 TMOD1P28289 359 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 EDRF1Q3B7T1 1238 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 HSP90AA4PQ58FG1 418 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 FAM114A1Q8IWE2 563 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 SYCP3Q8IZU3 236 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 TMEM161BQ8NDZ6 487 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 ANKRD20A12PQ8NF67 263 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 DEPTORQ8TB45 409 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 TRAF3IP3Q9Y228 551 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 PTPN22Q9Y2R2 807 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 CST5P28325 142 aaPredicted RBP24.84■■□□□ 1.57
IRF3-228ENST00000601291 HOXD13P35453 343 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 FKBP3Q00688 224 aaKnown RBP24.84■■□□□ 1.57
IRF3-228ENST00000601291 MTHFD1LQ6UB35 978 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 HS2ST1Q7LGA3 356 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 PRPF31Q8WWY3 499 aaKnown RBP24.84■■□□□ 1.57
IRF3-228ENST00000601291 SUCLA2Q9P2R7 463 aaPredicted RBP24.84■■□□□ 1.57
IRF3-228ENST00000601291 MAGEC2Q9UBF1 373 aaPredicted RBP24.84■■□□□ 1.57
IRF3-228ENST00000601291 EXOC7Q9UPT5 735 aa24.84■■□□□ 1.57
IRF3-228ENST00000601291 DENND3A2RUS2 1198 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 LRRIQ4A6NIV6 560 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 ADCY5O95622 1261 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 SERPINC1P01008 464 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 KCNA1Q09470 495 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 PCSK9Q8NBP7 692 aaKnown RBP24.83■■□□□ 1.57
IRF3-228ENST00000601291 GOLGA5Q8TBA6 731 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 KIFC3Q9BVG8 833 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 GBP3Q9H0R5 595 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 ARHGAP28Q9P2N2 729 aa24.83■■□□□ 1.57
IRF3-228ENST00000601291 ZMYM2Q9UBW7 1377 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 ASAP2O43150 1006 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 AP5Z1O43299 807 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 DEKP35659 375 aaKnown RBP24.82■■□□□ 1.56
IRF3-228ENST00000601291 CLCN3P51790 818 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 FANCCQ00597 558 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 MKRN4PQ13434 485 aaPredicted RBP24.82■■□□□ 1.56
IRF3-228ENST00000601291 DRP2Q13474 957 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 TFDP1Q14186 410 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 RNF180Q86T96 592 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 KSR1Q8IVT5 923 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 LMBR1Q8WVP7 490 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 SETD4Q9NVD3 440 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 TBX20Q9UMR3 447 aa24.82■■□□□ 1.56
IRF3-228ENST00000601291 MYCNP04198 464 aaPredicted RBP24.81■■□□□ 1.56
IRF3-228ENST00000601291 EEF1GP26641 437 aaKnown RBP24.81■■□□□ 1.56
IRF3-228ENST00000601291 LAMTOR4Q0VGL1 99 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 CAPSQ13938 189 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 MAP4K3Q8IVH8 894 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 C7orf31Q8N865 590 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 KLHDC9Q8NEP7 349 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 KCNN1Q92952 543 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 CEP63Q96MT8 703 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 CTAGE1Q96RT6 745 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 ADGRA3Q8IWK6 1321 aa24.81■■□□□ 1.56
IRF3-228ENST00000601291 KCNJ18B7U540 433 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 CBFA2T2O43439 604 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 RPL13P26373 211 aaKnown RBP24.8■■□□□ 1.56
IRF3-228ENST00000601291 KCNJ12Q14500 433 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 MARCH8Q5T0T0 291 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 CXCL17Q6UXB2 119 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 RHPN2Q8IUC4 686 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 LINC01465Q8N7H1 131 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 MAP7D2Q96T17 732 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 CGNQ9P2M7 1197 aaKnown RBP24.8■■□□□ 1.56
IRF3-228ENST00000601291 TGFB1I1O43294 461 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 GNAT1P11488 350 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 NR2F2P24468 414 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 ZNF75DP51815 510 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 SNRPFP62306 86 aaKnown RBP24.8■■□□□ 1.56
IRF3-228ENST00000601291 STRN3Q13033 797 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 TCP11X2Q5H9J9 407 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 NFRKBQ6P4R8 1299 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 LRRC55Q6ZSA7 311 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 SH3TC2Q8TF17 1288 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 C2orf40Q9H1Z8 148 aa24.8■■□□□ 1.56
IRF3-228ENST00000601291 PHLPP2Q6ZVD8 1323 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 C17orf102A2RUQ5 167 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 CETN3O15182 167 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 TPM3P06753 285 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 ASGR1P07306 291 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 EFNA5P52803 228 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 CCDC173Q0VFZ6 552 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 ADAM9Q13443 819 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 KCNA10Q16322 511 aa24.79■■□□□ 1.56
IRF3-228ENST00000601291 NFIL3Q16649 462 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms