RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 GATMP50440 423 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 FAM189BP81408 668 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 CDC42EP1Q00587 391 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 CAPSQ13938 189 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 ODR4Q5SWX8 454 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 NPAS4Q8IUM7 802 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 TCP11Q8WWU5 503 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
RPS28-203ENST00000600659 RNF19AQ9NV58 838 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 KIAA1024Q9UPX6 916 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 MYH11P35749 1972 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 UNC80Q8N2C7 3258 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 VWA3AA6NCI4 1184 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
RPS28-203ENST00000600659 GRB10Q13322 594 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 SLC24A5Q71RS6 500 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 IFNLR1Q8IU57 520 aaPredicted RBP17.52■□□□□ 0.4
RPS28-203ENST00000600659 RNF149Q8NC42 400 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 ARNTL2Q8WYA1 636 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 SCLT1Q96NL6 688 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 C17orf80Q9BSJ5 609 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 RAB34Q9BZG1 259 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 BHMT2Q9H2M3 363 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 C1orf112Q9NSG2 853 aa17.52■□□□□ 0.4
RPS28-203ENST00000600659 E9PMD0 336 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 ASAP2O43150 1006 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 FOSL2P15408 326 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 PTENP60484 403 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 PKP1Q13835 747 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 TMEM119Q4V9L6 283 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 KRT79Q5XKE5 535 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 PADI6Q6TGC4 694 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 ZNF598Q86UK7 904 aaKnown RBP17.51■□□□□ 0.39
RPS28-203ENST00000600659 BSNDQ8WZ55 320 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 TGS1Q96RS0 853 aaKnown RBP17.51■□□□□ 0.39
RPS28-203ENST00000600659 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
RPS28-203ENST00000600659 MYO7AQ13402 2215 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 PLXNA4Q9HCM2 1894 aa17.51■□□□□ 0.39
RPS28-203ENST00000600659 DENND3A2RUS2 1198 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 BMP15O95972 392 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 SRGAP2CP0DJJ0 459 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 CYP11B2P19099 503 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 POU3F3P20264 500 aaPredicted RBP17.5■□□□□ 0.39
RPS28-203ENST00000600659 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
RPS28-203ENST00000600659 POU5F1BQ06416 359 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 MXD4Q14582 209 aaPredicted RBP17.5■□□□□ 0.39
RPS28-203ENST00000600659 AMHR2Q16671 573 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 SRGAP1Q7Z6B7 1085 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 CLP1Q92989 425 aaKnown RBP17.5■□□□□ 0.39
RPS28-203ENST00000600659 USP28Q96RU2 1077 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 TRAIPQ9BWF2 469 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 ELAC1Q9H777 363 aaKnown RBP17.5■□□□□ 0.39
RPS28-203ENST00000600659 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
RPS28-203ENST00000600659 MORC2Q9Y6X9 1032 aaPredicted RBP17.5■□□□□ 0.39
RPS28-203ENST00000600659 EYA4O95677 639 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 HOXA11P31270 313 aaPredicted RBP17.49■□□□□ 0.39
RPS28-203ENST00000600659 MBTD1Q05BQ5 628 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 FAM102BQ5T8I3 360 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 ECHDC2Q86YB7 292 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
RPS28-203ENST00000600659 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 GDPD5Q8WTR4 605 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 AK8Q96MA6 479 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 CCDC43Q96MW1 224 aaKnown RBP17.49■□□□□ 0.39
RPS28-203ENST00000600659 INO80BQ9C086 356 aaPredicted RBP17.49■□□□□ 0.39
RPS28-203ENST00000600659 TMEM161AQ9NX61 479 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 HCSTQ9UBK5 93 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 FBXO2Q9UK22 296 aaPredicted RBP17.49■□□□□ 0.39
RPS28-203ENST00000600659 MTUS1Q9ULD2 1270 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
RPS28-203ENST00000600659 BRWD1Q9NSI6 2320 aa17.49■□□□□ 0.39
RPS28-203ENST00000600659 A0A0U1RQF3 1178 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 ARHGEF35A5YM69 484 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 STAG3L1P0CL83 205 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 FGFR1P11362 822 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 MAPK7Q13164 816 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 UBXN11Q5T124 520 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 CDCA2Q69YH5 1023 aaPredicted RBP17.48■□□□□ 0.39
RPS28-203ENST00000600659 CATSPER4Q7RTX7 472 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 DAW1Q8N136 415 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 MAFAQ8NHW3 353 aaPredicted RBP17.48■□□□□ 0.39
RPS28-203ENST00000600659 RUSC1Q9BVN2 902 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
RPS28-203ENST00000600659 POLD4Q9HCU8 107 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 CHST12Q9NRB3 414 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 PIN4Q9Y237 131 aaKnown RBP17.48■□□□□ 0.39
RPS28-203ENST00000600659 MTCH2Q9Y6C9 303 aa17.48■□□□□ 0.39
RPS28-203ENST00000600659 TSPAN1O60635 241 aa17.47■□□□□ 0.39
RPS28-203ENST00000600659 EDN1P05305 212 aa17.47■□□□□ 0.39
RPS28-203ENST00000600659 PHKA2P46019 1235 aa17.47■□□□□ 0.39
RPS28-203ENST00000600659 NASPP49321 788 aaPredicted RBP17.47■□□□□ 0.39
RPS28-203ENST00000600659 BTG3Q14201 252 aaPredicted RBP17.47■□□□□ 0.39
RPS28-203ENST00000600659 PAN2Q504Q3 1202 aaKnown RBP17.47■□□□□ 0.39
RPS28-203ENST00000600659 CLLU1OSQ5K130 101 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms