RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DRC1Q96MC2 740 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 OSMRQ99650 979 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 FDXACB1Q9BRP7 624 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 ZHX3Q9H4I2 956 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 ZMYND8Q9ULU4 1186 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 GINS2Q9Y248 185 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 FRMD3A2A2Y4 597 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 ASAP2O43150 1006 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 KLRC4O43908 158 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 TBCAO75347 108 aaKnown RBP22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 IQCF3P0C7M6 154 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 SRGAP2CP0DJJ0 459 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 IDEP14735 1019 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 SYN1P17600 705 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 PEX3P56589 373 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 MXD4Q14582 209 aaPredicted RBP22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 GPNMBQ14956 572 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 POSTNQ15063 836 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 RNF149Q8NC42 400 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 SCLYQ96I15 445 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 KIFC3Q9BVG8 833 aa22.14■■□□□ 1.13
SHKBP1-222ENST00000600320 TANC1Q9C0D5 1861 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 ADGRA3Q8IWK6 1321 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 TIMP1P01033 207 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 PLS3P13797 630 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 DPYDQ12882 1025 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 PNOCQ13519 176 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 KANK3Q6NY19 840 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 ZNF410Q86VK4 478 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 SFR1Q86XK3 245 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 NLRP7Q8WX94 980 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 ERCC4Q92889 916 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 IFT122Q9HBG6 1241 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 PARVGQ9HBI0 331 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 PANK4Q9NVE7 773 aa22.13■■□□□ 1.13
SHKBP1-222ENST00000600320 MYH11P35749 1972 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 LRRIQ4A6NIV6 560 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 M0QZ92 97 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 RAG1P15918 1043 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 NAMPTP43490 491 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 NPTX2P47972 431 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 CRYBB1P53674 252 aaPredicted RBP22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 COASYQ13057 564 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 UNC13DQ70J99 1090 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 MYCT1Q8N699 235 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 IFT74Q96LB3 600 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 SCLT1Q96NL6 688 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 FIZ1Q96SL8 496 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 C17orf75Q9HAS0 396 aa22.12■■□□□ 1.13
SHKBP1-222ENST00000600320 SCN5AQ14524 2016 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 NBNO60934 754 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 CSDE1O75534 798 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 DARSP14868 501 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 PTENP60484 403 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 DMP1Q13316 513 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 TFDP1Q14186 410 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 PPP2R5AQ15172 486 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 FBXO47Q5MNV8 452 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 ODR4Q5SWX8 454 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 IFNLR1Q8IU57 520 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 CCDC65Q8IXS2 484 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 ELOA2Q8IYF1 753 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 HPS3Q969F9 1004 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 VWCEQ96DN2 955 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 CLSTN2Q9H4D0 955 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 MINDY3Q9H8M7 445 aa22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 AGO3Q9H9G7 860 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 NOC2LQ9Y3T9 749 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-222ENST00000600320 LTBP2Q14767 1821 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 CCDC169A6NNP5 214 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 SLC16A4O15374 487 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 MBD3O95983 291 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 MYL1P05976 194 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 GHRP10912 638 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 FGFR4P22455 802 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 CDC42EP1Q00587 391 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 POU5F1BQ06416 359 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 EHHADHQ08426 723 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 LPIN1Q14693 890 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 CAMK4Q16566 473 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 KMT5BQ4FZB7 885 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 CDCA2Q69YH5 1023 aaPredicted RBP22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 ZNF710Q8N1W2 664 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 DEPTORQ8TB45 409 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 SPIRE2Q8WWL2 714 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 FGFBP2Q9BYJ0 223 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 GCOM2Q9BZD3 368 aaPredicted RBP22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 KMT5AQ9NQR1 393 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 TBC1D7Q9P0N9 293 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 LARSQ9P2J5 1176 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 PRKAG2Q9UGJ0 569 aa22.1■■□□□ 1.13
SHKBP1-222ENST00000600320 PVALEFA0A1B0GWK0 134 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 TRAK2O60296 914 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 RPN1P04843 607 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 GAP43P17677 238 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 NMT1P30419 496 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 PHKA2P46019 1235 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 NCKAP1LP55160 1127 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 NFKBIBQ15653 356 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 HERC4Q5GLZ8 1057 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms