RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MCM3P25205 808 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 MMP14P50281 582 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 GALCP54803 685 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 ANGEL2Q5VTE6 544 aaKnown RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 CYFIP1Q7L576 1253 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 DAW1Q8N136 415 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 MICALL1Q8N3F8 863 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 CTNNBL1Q8WYA6 563 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 PSMD1Q99460 953 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 TAS2R14Q9NYV8 317 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 STIM2Q9P246 746 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZNF536O15090 1300 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 GLI1P08151 1106 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 PALB2Q86YC2 1186 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZMYM2Q9UBW7 1377 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 H0YHG0 523 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 FOXN3O00409 490 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.42e-11■■■■■ 44.1
ARHGEF1-220ENST00000600274 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■■□ 19.8
ARHGEF1-220ENST00000600274 TNFAIP1Q13829 316 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 MCF2L2Q86YR7 1114 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 AGBL3Q8NEM8 1001 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZNF668Q96K58 619 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 HPCAL4Q9UM19 191 aa12.53□□□□□ -0.4
ARHGEF1-220ENST00000600274 LTBP1Q14766 1721 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 RARRES1P49788 294 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 TUBB4BP68371 445 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 SWSAP1Q6NVH7 229 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 WDR93Q6P2C0 686 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 STK24Q9Y6E0 443 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 LRRC37AA6NMS7 1700 aa12.52□□□□□ -0.4
ARHGEF1-220ENST00000600274 CETN1Q12798 172 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 BFSP1Q12934 665 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 MTERF2Q49AM1 385 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 KRIT1O00522 736 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM153BP0C7A2 387 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 KRT5P13647 590 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM153CQ494X1 144 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM153AQ9UHL3 310 aa12.52□□□□□ -0.41
ARHGEF1-220ENST00000600274 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 WDR46O15213 610 aaKnown RBP12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 ACTN2P35609 894 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 SOX5P35711 763 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PTGER2P43116 358 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PPP3CAQ08209 521 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 POMGNT1Q8WZA1 660 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 SIX2Q9NPC8 291 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 LOC102724159A0A0B4J2E5 919 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 F8VZ95 297 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 ITGA4P13612 1032 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 FERP16591 822 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 VAMP7P51809 220 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PGM5Q15124 567 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PWP2Q15269 919 aaKnown RBP12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 PLCB1Q9NQ66 1216 aa12.51□□□□□ -0.41
ARHGEF1-220ENST00000600274 HNRNPDLO14979 420 aaKnown RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 PJA2O43164 708 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 RAD51CO43502 376 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 TSEN2Q8NCE0 465 aaKnown RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 ACCSQ96QU6 501 aa12.5□□□□□ -0.41
ARHGEF1-220ENST00000600274 PAGR1Q9BTK6 254 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms