RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 RPS6KA5O75582 802 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 FGBP02675 491 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 GLRA2P23416 452 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 SYKP43405 635 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 EFNA5P52803 228 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 PTENP60484 403 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 GPNMBQ14956 572 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 ARSHQ5FYA8 562 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 CEP57L1Q8IYX8 460 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 RNF149Q8NC42 400 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 SPIRE2Q8WWL2 714 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 KCNN1Q92952 543 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 PANK2Q9BZ23 570 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 IFT122Q9HBG6 1241 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 GINS2Q9Y248 185 aa18.33■□□□□ 0.52
SHKBP1-219ENST00000599575 A0A087WZ62 844 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 A0A1B0GVL5 298 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 HIP1RO75146 1068 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 GHRP10912 638 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 ZNF131P52739 623 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 SMTNP53814 917 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 PAK2Q13177 524 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 DMP1Q13316 513 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 IKBKEQ14164 716 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 KANK3Q6NY19 840 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 ZBTB8OSQ8IWT0 167 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 FSIP1Q8NA03 581 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 LRRC15Q8TF66 581 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 DHX58Q96C10 678 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 NLRP4Q96MN2 994 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 OSMRQ99650 979 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 FDXACB1Q9BRP7 624 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 SEL1LQ9UBV2 794 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
SHKBP1-219ENST00000599575 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 ARID2Q68CP9 1835 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 SRGAP2CP0DJJ0 459 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 PLS3P13797 630 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 MAPK7Q13164 816 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 CAPSQ13938 189 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 TMEM240Q5SV17 173 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 CDCA2Q69YH5 1023 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 C16orf59Q7L2K0 433 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 DAW1Q8N136 415 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 ASAP3Q8TDY4 903 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 HERVK_113Q902F9 699 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 PARVGQ9HBI0 331 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 GPRC5CQ9NQ84 441 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 CHST12Q9NRB3 414 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 PADI3Q9ULW8 664 aa18.31■□□□□ 0.52
SHKBP1-219ENST00000599575 GOLGA6L22H0YM25 854 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 GAP43P17677 238 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 NDUFA8P51970 172 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 UBE2HP62256 183 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 FAM160A1Q05DH4 1040 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 GIT2Q14161 759 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 DHX8Q14562 1220 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 ZNF365Q70YC5 407 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 MAEAQ7L5Y9 396 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 KSR1Q8IVT5 923 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 DEPTORQ8TB45 409 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 TMEM40Q8WWA1 233 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 DDX12PQ92771 950 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 REEP2Q9BRK0 252 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 AGO3Q9H9G7 860 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 CDHR5Q9HBB8 845 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 ERVK-5Q9HDB9 667 aa18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 NOC2LQ9Y3T9 749 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-219ENST00000599575 LRRIQ4A6NIV6 560 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 FAM13AO94988 1023 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 MAPTP10636 758 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 AXLP30530 894 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 CD52P31358 61 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 FAM187BQ17R55 369 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 RASIP1Q5U651 963 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 C7orf25Q9BPX7 421 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 PRMT7Q9NVM4 692 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 ST3GAL5Q9UNP4 418 aa18.29■□□□□ 0.52
SHKBP1-219ENST00000599575 FRMD3A2A2Y4 597 aa18.28■□□□□ 0.52
SHKBP1-219ENST00000599575 MYMKA6NI61 221 aa18.28■□□□□ 0.52
SHKBP1-219ENST00000599575 ACTN4O43707 911 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-219ENST00000599575 ZNF202O95125 648 aa18.28■□□□□ 0.52
SHKBP1-219ENST00000599575 NPTX2P47972 431 aa18.28■□□□□ 0.52
SHKBP1-219ENST00000599575 EPHB4P54760 987 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms